RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 CMA1P23946 247 aa24.94■■□□□ 1.58
SSNA1-203ENST00000463511 DDX6P26196 483 aaKnown RBP eCLIP24.94■■□□□ 1.58
SSNA1-203ENST00000463511 POLR2BP30876 1174 aaKnown RBP24.94■■□□□ 1.58
SSNA1-203ENST00000463511 TFAMQ00059 246 aaKnown RBP24.94■■□□□ 1.58
SSNA1-203ENST00000463511 KCNA1Q09470 495 aa24.94■■□□□ 1.58
SSNA1-203ENST00000463511 GRSF1Q12849 480 aaKnown RBP eCLIP24.94■■□□□ 1.58
SSNA1-203ENST00000463511 NT5DC4Q86YG4 428 aa24.94■■□□□ 1.58
SSNA1-203ENST00000463511 ZSWIM2Q8NEG5 633 aa24.94■■□□□ 1.58
SSNA1-203ENST00000463511 FAM213AQ9BRX8 229 aa24.94■■□□□ 1.58
SSNA1-203ENST00000463511 MRPL44Q9H9J2 332 aaKnown RBP24.94■■□□□ 1.58
SSNA1-203ENST00000463511 KIF9Q9HAQ2 790 aa24.94■■□□□ 1.58
SSNA1-203ENST00000463511 TDP1Q9NUW8 608 aa24.94■■□□□ 1.58
SSNA1-203ENST00000463511 RPP40O75818 363 aaKnown RBP24.93■■□□□ 1.58
SSNA1-203ENST00000463511 KRT37O76014 449 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 KCNA4P22459 653 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 PNPLA4P41247 253 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 POSTNQ15063 836 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 CCDC6Q16204 474 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 NFE2Q16621 373 aaPredicted RBP24.93■■□□□ 1.58
SSNA1-203ENST00000463511 CCDC73Q6ZRK6 1079 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 PDCL2Q8N4E4 241 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 PDILTQ8N807 584 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 GAB3Q8WWW8 586 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 MRPS31Q92665 395 aaKnown RBP24.93■■□□□ 1.58
SSNA1-203ENST00000463511 SAAL1Q96ER3 474 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 FAM84AQ96KN4 292 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 ARRDC1-AS1Q9H2J1 176 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 FAM13BQ9NYF5 915 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 TBC1D7Q9P0N9 293 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 STK17AQ9UEE5 414 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 L1RE1Q9UN81 338 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 AGAP1Q9UPQ3 857 aa24.93■■□□□ 1.58
SSNA1-203ENST00000463511 AXIN1O15169 862 aa24.92■■□□□ 1.58
SSNA1-203ENST00000463511 FOXD2O60548 495 aaPredicted RBP24.92■■□□□ 1.58
SSNA1-203ENST00000463511 EGFP01133 1207 aa24.92■■□□□ 1.58
SSNA1-203ENST00000463511 ITGB3P05106 788 aa24.92■■□□□ 1.58
SSNA1-203ENST00000463511 CSH1P0DML2 217 aa24.92■■□□□ 1.58
SSNA1-203ENST00000463511 CSH2P0DML3 217 aa24.92■■□□□ 1.58
SSNA1-203ENST00000463511 ACAT1P24752 427 aaKnown RBP24.92■■□□□ 1.58
SSNA1-203ENST00000463511 SF3A2Q15428 464 aaKnown RBP24.92■■□□□ 1.58
SSNA1-203ENST00000463511 E2F4Q16254 413 aa24.92■■□□□ 1.58
SSNA1-203ENST00000463511 AASDHQ4L235 1098 aaPredicted RBP24.92■■□□□ 1.58
SSNA1-203ENST00000463511 CC2D1AQ6P1N0 951 aaPredicted RBP24.92■■□□□ 1.58
SSNA1-203ENST00000463511 STRA6Q9BX79 667 aa24.92■■□□□ 1.58
SSNA1-203ENST00000463511 POLR3BQ9NW08 1133 aaPredicted RBP24.92■■□□□ 1.58
SSNA1-203ENST00000463511 DDX43Q9NXZ2 648 aaKnown RBP24.92■■□□□ 1.58
SSNA1-203ENST00000463511 SLC8A2Q9UPR5 921 aa24.92■■□□□ 1.58
SSNA1-203ENST00000463511 A0A1W2PQ27 194 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 A0A1W2PQ64 194 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 A0A1W2PQD8 194 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 TRDMT1O14717 391 aaKnown RBP24.91■■□□□ 1.58
SSNA1-203ENST00000463511 ATG13O75143 517 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 RNF40O75150 1001 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 TADA3O75528 432 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 CCDC192P0DO97 292 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 STAT6P42226 847 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 CCDC142Q17RM4 750 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 NAIF1Q69YI7 327 aaPredicted RBP24.91■■□□□ 1.58
SSNA1-203ENST00000463511 SCARA3Q6AZY7 606 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 KBTBD6Q86V97 674 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 MON1AQ86VX9 555 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 BRSK2Q8IWQ3 736 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 C1orf127Q8N9H9 656 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 TTC16Q8NEE8 873 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 SEL1LQ9UBV2 794 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 NUP205Q92621 2012 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 LAMA1P25391 3075 aa24.91■■□□□ 1.58
SSNA1-203ENST00000463511 FAM237AA0A1B0GTK4 181 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 A0A1B0GVL5 298 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 MYMKA6NI61 221 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 HUS1O60921 280 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 CYP2F1P24903 491 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 DDR2Q16832 855 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 L1TD1Q5T7N2 865 aaKnown RBP24.9■■□□□ 1.58
SSNA1-203ENST00000463511 CACNA2D4Q7Z3S7 1137 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 ACCSQ96QU6 501 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 FBRSL1Q9HCM7 1045 aaKnown RBP24.9■■□□□ 1.58
SSNA1-203ENST00000463511 RBAKQ9NYW8 714 aaPredicted RBP24.9■■□□□ 1.58
SSNA1-203ENST00000463511 EXOC7Q9UPT5 735 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 HPSEQ9Y251 543 aa24.9■■□□□ 1.58
SSNA1-203ENST00000463511 CCDC163A0A0D9SF12 145 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 POLR2DO15514 142 aaKnown RBP24.89■■□□□ 1.58
SSNA1-203ENST00000463511 GCNT3O95395 438 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 PFKFB1P16118 471 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 GAP43P17677 238 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 CASP5P51878 434 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 RPL10AP62906 217 aaKnown RBP24.89■■□□□ 1.58
SSNA1-203ENST00000463511 INTS6LQ5JSJ4 861 aaKnown RBP24.89■■□□□ 1.58
SSNA1-203ENST00000463511 IL31Q6EBC2 164 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 CLEC17AQ6ZS10 378 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 C12orf50Q8NA57 414 aaPredicted RBP24.89■■□□□ 1.58
SSNA1-203ENST00000463511 NOC3LQ8WTT2 800 aaKnown RBP24.89■■□□□ 1.58
SSNA1-203ENST00000463511 DNAJC19Q96DA6 116 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 ACBD6Q9BR61 282 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 TRPC7Q9HCX4 862 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 ABCB6Q9NP58 842 aa24.89■■□□□ 1.58
SSNA1-203ENST00000463511 UXTQ9UBK9 157 aaPredicted RBP24.89■■□□□ 1.58
SSNA1-203ENST00000463511 GOLGA8IPA6NC78 632 aa24.88■■□□□ 1.57
SSNA1-203ENST00000463511 GOLGA8JA6NMD2 632 aa24.88■■□□□ 1.57
SSNA1-203ENST00000463511 SOBPA7XYQ1 873 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms