RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 RTP1P59025 263 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 PSMC6P62333 389 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 PTPN11Q06124 597 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 KCNMA1Q12791 1236 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 ZNF568Q3ZCX4 644 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 SLC44A4Q53GD3 710 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 C1orf53Q5VUE5 145 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 CGB2Q6NT52 195 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 VSTM1Q6UX27 236 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 ZDHHC24Q6UX98 284 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 SLC39A5Q6ZMH5 540 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 ARHGAP24Q8N264 748 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 AK8Q96MA6 479 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 PCYT2Q99447 389 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 OXCT2Q9BYC2 517 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 SCN10AQ9Y5Y9 1956 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 DNAH12Q6ZR08 3092 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 ARVCFO00192 962 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 KIAA0391O15091 583 aaKnown RBP12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 HNRNPRO43390 633 aaKnown RBP12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 AP1G1O43747 822 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 CCDC22O60826 627 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 CAPN15O75808 1086 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 GFPT2O94808 682 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 P4HBP07237 508 aaKnown RBP12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 STX2P32856 288 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 IL9RQ01113 521 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 GRM2Q14416 872 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 SNX17Q15036 470 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 FAM47CQ5HY64 1035 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 ACAD11Q709F0 780 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 HS2ST1Q7LGA3 356 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 PEX26Q7Z412 305 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 TPCN2Q8NHX9 752 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 TTC8Q8TAM2 541 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 FAM167AQ96KS9 214 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 AP1M1Q9BXS5 423 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 PITPNM3Q9BZ71 974 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 LRRC4CQ9HCJ2 640 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 LGALS13Q9UHV8 139 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 GGT7Q9UJ14 662 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 MAFBQ9Y5Q3 323 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 IGSF9BQ9UPX0 1349 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 POTEMA6NI47 508 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 EML1O00423 815 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 HNRNPCP07910 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 T-ENOLP0DO92 83 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 CYP11B2P19099 503 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 CRABP2P29373 138 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 QARSP47897 775 aaKnown RBP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 ADARP55265 1226 aaKnown RBP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 PSMC5P62195 406 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 PDE1BQ01064 536 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 HSP90AA5PQ58FG0 334 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 SLC43A3Q8NBI5 491 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 ERP27Q96DN0 273 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 POLR3CQ9BUI4 534 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 NKIRAS1Q9NYS0 192 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 CHKBQ9Y259 395 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 DDX3XO00571 662 aaKnown RBP eCLIP12.07□□□□□ -0.482e-8■■■■■ 34.5
TRAPPC3-205ENST00000462715 PORP16435 677 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 TAC1P20366 129 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 CHRNA3P32297 505 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 SESN3P58005 492 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 RNASE9P60153 205 aaKnown RBP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 RCN1Q15293 331 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 IL17AQ16552 155 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 WDR72Q3MJ13 1102 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 KHDC1Q4VXA5 237 aaKnown RBP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 ZCWPW2Q504Y3 356 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 B3GNT6Q6ZMB0 384 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 ADGRG6Q86SQ4 1221 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 NRG4Q8WWG1 115 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 STMN2Q93045 179 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 EIF2AK1Q9BQI3 630 aaKnown RBP12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 PCYOX1Q9UHG3 505 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 HAO1Q9UJM8 370 aa12.07□□□□□ -0.48
TRAPPC3-205ENST00000462715 PVALEFA0A1B0GWK0 134 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 TLR3O15455 904 aaKnown RBP12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 ENTPD5O75356 428 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 ASMTLO95671 621 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 EPHB2P29323 1055 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 CDR2Q01850 454 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 DSG1Q02413 1049 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 NR1H3Q13133 447 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 MAPK7Q13164 816 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 ASIC2Q16515 512 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 CLPPQ16740 277 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 DAAM2Q86T65 1068 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 RIBC1Q8N443 379 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 ITPKCQ96DU7 683 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 LXNQ9BS40 222 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 UBN1Q9NPG3 1134 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 NRBP2Q9NSY0 501 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms