RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ANKRD11Q6UB99 2663 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ANO9A1A5B4 782 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 PIRO00625 290 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 GCNT3O95395 438 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 CYP11A1P05108 521 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 SLFN14P0C7P3 912 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ODC1P11926 461 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 WEE1P30291 646 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 HOXA6P31267 233 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ABCD1P33897 745 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 MATR3P43243 847 aaKnown RBP eCLIP8.55□□□□□ -1.043e-7■■■□□ 14.8
CDC42BPA-210ENST00000462553 CDR1P51861 262 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 NDUFA8P51970 172 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 KPNA1P52294 538 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ASIC1P78348 528 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 NUCB2P80303 420 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 CUL4BQ13620 913 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 CSRP2Q16527 193 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 SLC39A12Q504Y0 691 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ARHGAP29Q52LW3 1261 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 PPM1JQ5JR12 505 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 DGKKQ5KSL6 1271 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 GPR158Q5T848 1215 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 C9orf57Q5W0N0 161 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 HEATR6Q6AI08 1181 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 JADE1Q6IE81 842 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 CRELD2Q6UXH1 353 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 DSTYKQ6XUX3 929 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 UNC13DQ70J99 1090 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 EPM2AIP1Q7L775 607 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 USP37Q86T82 979 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 TMEM150AQ86TG1 271 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 WDR5BQ86VZ2 330 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 CCDC65Q8IXS2 484 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 YAF2Q8IY57 180 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 RIN3Q8TB24 985 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 SENP8Q96LD8 212 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ZCWPW1Q9H0M4 648 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 SMG9Q9H0W8 520 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 BLZF1Q9H2G9 400 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 MRPL44Q9H9J2 332 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 HPS4Q9NQG7 708 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 HSFX1Q9UBD0 423 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 CPSF3Q9UKF6 684 aaKnown RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ATP6V1DQ9Y5K8 247 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 CACNA1EQ15878 2313 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 LOC400499M0QZD8 3231 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 ATRXP46100 2492 aa8.55□□□□□ -1.04
CDC42BPA-210ENST00000462553 A0A1W2PQ27 194 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 A0A1W2PQ64 194 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 A0A1W2PQD8 194 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 OTOL1A6NHN0 477 aaPredicted RBP8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 XPOTO43592 962 aaKnown RBP8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 EXTL3O43909 919 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 PRPF6O94906 941 aaKnown RBP8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 CNR2P34972 360 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 AFMP43652 599 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 ALDH1A3P47895 512 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 WNT7BP56706 349 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 ALCAMQ13740 583 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 FAM26FQ5R3K3 315 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 FSTL4Q6MZW2 842 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 LRRTM3Q86VH5 581 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 FSIP1Q8NA03 581 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 STKLD1Q8NE28 680 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 BPIFB1Q8TDL5 484 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 PAGE5Q96GU1 130 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 ACCSQ96QU6 501 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 SEPT5Q99719 369 aaPredicted RBP8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 FAM83CQ9BQN1 747 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 CBWD1Q9BRT8 395 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 MSTO1Q9BUK6 570 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 SLC46A2Q9BY10 475 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 SCAND2PQ9GZW5 306 aaPredicted RBP8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 ATXN3LQ9H3M9 355 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 TASP1Q9H6P5 420 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 RPF1Q9H9Y2 349 aaKnown RBP8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 RXFP3Q9NSD7 469 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 CCL26Q9Y258 94 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 UBE4BO95155 1302 aa8.54□□□□□ -1.04
CDC42BPA-210ENST00000462553 EIF3DO15371 548 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 TADA3O75528 432 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 EPN2O95208 641 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 FGF19O95750 216 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 HMGA1P17096 107 aaKnown RBP8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 GARTP22102 1010 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 CDC25CP30307 473 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 SYKP43405 635 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 ACOT2P49753 483 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 AMPD3Q01432 767 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 TMEM132DQ14C87 1099 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 KYAT1Q16773 422 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 BMT2Q1RMZ1 405 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 ITPRIPL2Q3MIP1 535 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 TMEM196Q5HYL7 178 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms