RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 LRRN2O75325 713 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 MOSPD3O75425 235 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 USP17L7P0C7H9 530 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 KRT13P13646 458 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 ATF6P18850 670 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 CMA1P23946 247 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 FCARP24071 287 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 CYP2F1P24903 491 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 RPL13P26373 211 aaKnown RBP9.48□□□□□ -0.89
LDB1-203ENST00000461873 CXCL12P48061 93 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 MLLT6P55198 1093 aaPredicted RBP9.48□□□□□ -0.89
LDB1-203ENST00000461873 CYP24A1Q07973 514 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 GRSF1Q12849 480 aaKnown RBP eCLIP9.48□□□□□ -0.89
LDB1-203ENST00000461873 PSMD6Q15008 389 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 ITPRIPL2Q3MIP1 535 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 CFAP221Q4G0U5 840 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 ZNF667Q5HYK9 610 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 CEP135Q66GS9 1140 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 VSTM1Q6UX27 236 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 GAREM2Q75VX8 874 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 ASCL5Q7RTU5 278 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 LRRTM3Q86VH5 581 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 RALGPS2Q86X27 583 aaPredicted RBP9.48□□□□□ -0.89
LDB1-203ENST00000461873 CMTM8Q8IZV2 173 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 TTC9BQ8N6N2 239 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 ZSWIM2Q8NEG5 633 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 OR5B17Q8NGF7 314 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 CCDC26Q8TAB7 109 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 TTC8Q8TAM2 541 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 SCFD1Q8WVM8 642 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 PAGE5Q96GU1 130 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 MED10Q9BTT4 135 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 FGFBP2Q9BYJ0 223 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 TDP1Q9NUW8 608 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 TRPM5Q9NZQ8 1165 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 HOOK1Q9UJC3 728 aaKnown RBP9.48□□□□□ -0.89
LDB1-203ENST00000461873 GMEB2Q9UKD1 530 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 MTF2Q9Y483 593 aaPredicted RBP9.48□□□□□ -0.89
LDB1-203ENST00000461873 PCDHGA2Q9Y5H1 932 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 TICRRQ7Z2Z1 1910 aa9.48□□□□□ -0.89
LDB1-203ENST00000461873 SPECC1L-ADORA2AF8WAN1 911 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 ATG13O75143 517 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 VNN2O95498 520 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 FAM163BP0C2L3 166 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 PFKFB1P16118 471 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 WARSP23381 471 aaKnown RBP9.47□□□□□ -0.89
LDB1-203ENST00000461873 BDNFP23560 247 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 CASP1P29466 404 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 WEE1P30291 646 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 PPP3CCP48454 512 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 IFNAR2P48551 515 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 NLRP12P59046 1061 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 PSMC1P62191 440 aaKnown RBP9.47□□□□□ -0.89
LDB1-203ENST00000461873 FCHO2Q0JRZ9 810 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 IFRD2Q12894 506 aaPredicted RBP9.47□□□□□ -0.89
LDB1-203ENST00000461873 PDGFRLQ15198 375 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 SOWAHAQ2M3V2 549 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 ZNF699Q32M78 642 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 KMT5BQ4FZB7 885 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 STXBP5Q5T5C0 1151 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 TDRD10Q5VZ19 366 aaKnown RBP9.47□□□□□ -0.89
LDB1-203ENST00000461873 TXNDC8Q6A555 127 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 DENND5BQ6ZUT9 1274 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 EPM2AIP1Q7L775 607 aaPredicted RBP9.47□□□□□ -0.89
LDB1-203ENST00000461873 MON1AQ86VX9 555 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 CPA6Q8N4T0 437 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 GPR161Q8N6U8 529 aaKnown RBP9.47□□□□□ -0.89
LDB1-203ENST00000461873 STKLD1Q8NE28 680 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 GLIS3Q8NEA6 775 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 RUBCNQ92622 972 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 CLDN23Q96B33 292 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 TNIP3Q96KP6 325 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 CEP295NLQ96MC4 621 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 SLITRK1Q96PX8 696 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 SLC46A2Q9BY10 475 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 LRRC3Q9BY71 257 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 NACA2Q9H009 215 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 GKN1Q9NS71 199 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 ZSCAN32Q9NX65 697 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 DLGAP2Q9P1A6 1054 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 TSC2P49815 1807 aa9.47□□□□□ -0.89
LDB1-203ENST00000461873 NUP210Q8TEM1 1887 aaPredicted RBP9.47□□□□□ -0.89
LDB1-203ENST00000461873 PIEZO1Q92508 2521 aa9.46□□□□□ -0.89
LDB1-203ENST00000461873 MYBPHLA2RUH7 354 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 GABRDO14764 452 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 TGFB1I1O43294 461 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 RPN1P04843 607 aaKnown RBP9.46□□□□□ -0.9
LDB1-203ENST00000461873 HDCP19113 662 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 MAGEA11P43364 429 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 GPR15P49685 360 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 FAM160A1Q05DH4 1040 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 MTAPQ13126 283 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 RUNX3Q13761 415 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 PKP1Q13835 747 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 PON2Q15165 354 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 BMT2Q1RMZ1 405 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 SGSM1Q2NKQ1 1148 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 MDH1BQ5I0G3 518 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 SDHAF4Q5VUM1 108 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 C12orf56Q8IXR9 622 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms