RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 NOTOA8MTQ0 251 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 IPO5O00410 1097 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 PPFIA4O75335 1185 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 ULK1O75385 1050 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 PSMD10O75832 226 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 PRNPP04156 253 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 LGALS2P05162 132 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 ITGB8P26012 769 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 ERVK-21P61565 698 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 SP4Q02446 784 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 TLE2Q04725 743 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 SPIRE1Q08AE8 756 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 ITGA7Q13683 1181 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 TRIM29Q14134 588 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 DGKDQ16760 1214 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 PRSS36Q5K4E3 855 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 PPP4R3AQ6IN85 833 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 ARHGAP36Q6ZRI8 547 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 CEP128Q6ZU80 1094 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 ANKRD33Q7Z3H0 272 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 C11orf74Q86VG3 221 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 NOSTRINQ8IVI9 506 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 CBARPQ8N350 705 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 ANKS4BQ8N8V4 417 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 SLC5A5Q92911 643 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 GLT1D1Q96MS3 346 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 ZNF577Q9BSK1 485 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 YIPF4Q9BSR8 244 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 MTG1Q9BT17 334 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 MENTQ9BUN1 341 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 TMEM60Q9H2L4 133 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 KCNMB3Q9NPA1 279 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 IMPACTQ9P2X3 320 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 SLC9A2Q9UBY0 812 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 A0A0U1RQG5 324 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 TRIM43BA6NCK2 446 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 DDX39AO00148 427 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 MAN2B1O00754 1011 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 DVL2O14641 736 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 CCNT1O60563 726 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 CABYRO75952 493 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 CD4P01730 458 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 MSL3P1P0C860 447 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 KRT15P19012 456 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 TCF7P36402 384 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 ACTR2P61160 394 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 IRF9Q00978 393 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 SETQ01105 290 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 MVKQ03426 396 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 ABHD15Q6UXT9 468 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 ZNF574Q6ZN55 896 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 PTRH1Q86Y79 214 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 FAM126BQ8IXS8 530 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 Q8N3U1 123 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 LZTR1Q8N653 840 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 C4orf32Q8N8J7 132 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 CLRN3Q8NCR9 226 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 GIMAP8Q8ND71 665 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 PIP4K2CQ8TBX8 421 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 SEPT1Q8WYJ6 367 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 TRIM43Q96BQ3 446 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 MTMR9Q96QG7 549 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 TRPV6Q9H1D0 765 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 RNPEPQ9H4A4 650 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 DDX25Q9UHL0 483 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 SLC5A6Q9Y289 635 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 ATP11BQ9Y2G3 1177 aa8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 COA3Q9Y2R0 106 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-212ENST00000461239 KCNK3O14649 394 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 AKAP10O43572 662 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 TSPAN6O43657 245 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 B4GALT4O60513 344 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 PQBP1O60828 265 aaKnown RBP8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 DGKIO75912 1065 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 KRT37O76014 449 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 EFEMP2O95967 443 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 SYT1P21579 422 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 HOXC8P31273 242 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 GRIK1P39086 918 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 RAB27AP51159 221 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 ZNF200P98182 395 aaPredicted RBP8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 KIAA0753Q2KHM9 967 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 INAVAQ3KP66 663 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 UTP14CQ5TAP6 766 aaKnown RBP8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 MROH9Q5TGP6 573 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 SESTD1Q86VW0 696 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 CCDC60Q8IWA6 550 aaPredicted RBP8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 HSCBQ8IWL3 235 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 TOX2Q96NM4 488 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 RIT2Q99578 217 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 PLCD4Q9BRC7 762 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 HTATIP2Q9BUP3 242 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 UNC45AQ9H3U1 944 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 SLC6A20Q9NP91 592 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 PDLIM7Q9NR12 457 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 TBC1D22BQ9NU19 505 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 TRMT13Q9NUP7 481 aaKnown RBP8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 HDAC6Q9UBN7 1215 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 ACSL6Q9UKU0 697 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 SRPK3Q9UPE1 567 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms