RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 PRKCBP05771 671 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 HSP90AA1P07900 732 aaKnown RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 PLA2G4BP0C869 781 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 ITGA4P13612 1032 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 MARCKSP29966 332 aaPredicted RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 PPM1AP35813 382 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 ETV3P41162 512 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 ALDH7A1P49419 539 aaKnown RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 EFNA5P52803 228 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 SLC12A3P55017 1021 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 BCAR1P56945 870 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 TFF2Q03403 129 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 KRT17Q04695 432 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 MAPK7Q13164 816 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 DMP1Q13316 513 aaPredicted RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 PRPF4BQ13523 1007 aaKnown RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 SLC27A1Q6PCB7 646 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 LSRQ86X29 649 aaPredicted RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 HACE1Q8IYU2 909 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 DAW1Q8N136 415 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 SLC39A11Q8N1S5 342 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 RBBP8NLQ8NC74 664 aaPredicted RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 URGCPQ8TCY9 931 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 MRPS27Q92552 414 aaKnown RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 PPP2R3CQ969Q6 453 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 PABPC5Q96DU9 382 aaKnown RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 CALML4Q96GE6 196 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 DRC1Q96MC2 740 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 USP28Q96RU2 1077 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 NTPCRQ9BSD7 190 aaKnown RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 KIFC3Q9BVG8 833 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 TRIM6Q9C030 488 aaPredicted RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 CCSER1Q9C0I3 900 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 CCDC113Q9H0I3 377 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 NRDE2Q9H7Z3 1164 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 UBE2ZQ9H832 354 aaPredicted RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 POLD4Q9HCU8 107 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 TLR9Q9NR96 1032 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 TBC1D13Q9NVG8 400 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 SPG21Q9NZD8 308 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 PUF60Q9UHX1 559 aaKnown RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 KCNG1Q9UIX4 513 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 FBXO2Q9UK22 296 aaPredicted RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 STRIP2Q9ULQ0 834 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 GIT1Q9Y2X7 761 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 SRPRBQ9Y5M8 271 aaKnown RBP7.58□□□□□ -1.2
NUP50-212ENST00000461194 LOXHD1Q8IVV2 1947 aa7.58□□□□□ -1.2
NUP50-212ENST00000461194 PHLPP2Q6ZVD8 1323 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 TRANK1O15050 2925 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 SPTBN5Q9NRC6 3674 aaKnown RBP7.57□□□□□ -1.2
NUP50-212ENST00000461194 CCDC169A6NNP5 214 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 K7ERI5 159 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 N4BP3O15049 544 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 UBOX5O94941 541 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 CSPG5O95196 566 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 NPTXRO95502 500 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 GALTP07902 379 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 PLS3P13797 630 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 FOSL1P15407 271 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 PBX3P40426 434 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 NPTX2P47972 431 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 PEX3P56589 373 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 CEBPZQ03701 1054 aaKnown RBP7.57□□□□□ -1.2
NUP50-212ENST00000461194 RNASELQ05823 741 aaKnown RBP7.57□□□□□ -1.2
NUP50-212ENST00000461194 HYAL1Q12794 435 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 SLC39A14Q15043 492 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 KARSQ15046 597 aaKnown RBP7.57□□□□□ -1.2
NUP50-212ENST00000461194 PPP2R5EQ16537 467 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 CPSF6Q16630 551 aaKnown RBP eCLIP7.57□□□□□ -1.2
NUP50-212ENST00000461194 LEXMQ3ZCV2 418 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 SFRP5Q5T4F7 317 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 CDR2LQ86X02 465 aaPredicted RBP7.57□□□□□ -1.2
NUP50-212ENST00000461194 ZNF280BQ86YH2 543 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 MICAL1Q8TDZ2 1067 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 LRRC15Q8TF66 581 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 GAD1Q99259 594 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 TM9SF2Q99805 663 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 TMEM175Q9BSA9 504 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 NXF3Q9H4D5 531 aaKnown RBP7.57□□□□□ -1.2
NUP50-212ENST00000461194 PDZD7Q9H5P4 517 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 KMT5AQ9NQR1 393 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 BLOC1S4Q9NUP1 217 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 ARHGAP28Q9P2N2 729 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 HES2Q9Y543 173 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 ZMYM2Q9UBW7 1377 aa7.57□□□□□ -1.2
NUP50-212ENST00000461194 COL4A4P53420 1690 aaPredicted RBP7.57□□□□□ -1.2
NUP50-212ENST00000461194 XIRP2A4UGR9 3374 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 VCANP13611 3396 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 RALGAPA2Q2PPJ7 1873 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 ARL5CA6NH57 179 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 NT5C1B-RDH14C9J2C7 533 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 B4GALT3O60512 393 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 ZC3H11AO75152 810 aaKnown RBP eCLIP7.56□□□□□ -1.2
NUP50-212ENST00000461194 DDHD2O94830 711 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 POMCP01189 267 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 ALDH2P05091 517 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 EDN1P05305 212 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 ZSCAN22P10073 491 aaPredicted RBP7.56□□□□□ -1.2
NUP50-212ENST00000461194 ITIH2P19823 946 aa7.56□□□□□ -1.2
NUP50-212ENST00000461194 KCNA5P22460 613 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms