RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MYH11P35749 1972 aa18.58■□□□□ 0.56
TOP3A-202ENST00000461127 GCN1Q92616 2671 aaKnown RBP18.58■□□□□ 0.56
TOP3A-202ENST00000461127 FREM2Q5SZK8 3169 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 ANK1P16157 1881 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 CD2BP2O95400 341 aaKnown RBP18.57■□□□□ 0.56
TOP3A-202ENST00000461127 CKMP06732 381 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 USP17L7P0C7H9 530 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 GUCY2CP25092 1073 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 LIG4P49917 911 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 SEC13P55735 322 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 SEMA3BQ13214 749 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 BYSLQ13895 437 aaKnown RBP18.57■□□□□ 0.56
TOP3A-202ENST00000461127 ENOX2Q16206 610 aaKnown RBP18.57■□□□□ 0.56
TOP3A-202ENST00000461127 CRY1Q16526 586 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 ZNF423Q2M1K9 1284 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 EML3Q32P44 896 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 SLC23A3Q6PIS1 610 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 HAPLN2Q9GZV7 340 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 TMEM206Q9H813 350 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 TRPC7Q9HCX4 862 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 GPSM3Q9Y4H4 160 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 WNT6Q9Y6F9 365 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 TSC2P49815 1807 aa18.57■□□□□ 0.56
TOP3A-202ENST00000461127 SETXQ7Z333 2677 aaKnown RBP18.56■□□□□ 0.56
TOP3A-202ENST00000461127 TRAV19A0A0A6YYK7 116 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 FAM221BA6H8Z2 402 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 K7ELQ4 463 aaPredicted RBP18.56■□□□□ 0.56
TOP3A-202ENST00000461127 CYB561D2O14569 222 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 OGTO15294 1046 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 JAK2O60674 1132 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 CFIP05156 583 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 GUCY1B3Q02153 619 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 RAD51AP2Q09MP3 1159 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 HNRNPDQ14103 355 aaKnown RBP18.56■□□□□ 0.56
TOP3A-202ENST00000461127 ZNF77Q15935 545 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 ME3Q16798 604 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 SOWAHCQ53LP3 525 aaPredicted RBP18.56■□□□□ 0.56
TOP3A-202ENST00000461127 SPDYCQ5MJ68 293 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 JADE1Q6IE81 842 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 C19orf48Q6RUI8 117 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 ARMCX6Q7L4S7 300 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 PDZD3Q86UT5 571 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 CHCHD4Q8N4Q1 142 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 IGSF22Q8N9C0 903 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 WHAMMQ8TF30 809 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 PYM1Q9BRP8 204 aaKnown RBP18.56■□□□□ 0.56
TOP3A-202ENST00000461127 LIMCH1Q9UPQ0 1083 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 OBSL1O75147 1896 aa18.56■□□□□ 0.56
TOP3A-202ENST00000461127 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 PIRO00625 290 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 HNRNPDLO14979 420 aaKnown RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 PRPF40AO75400 957 aaKnown RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 NFATC1O95644 943 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 HOXD12P35452 270 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 P2RY2P41231 377 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 TRAPPC10P48553 1259 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 MRPS21P82921 87 aaKnown RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 TSPY1Q01534 308 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 GFPT1Q06210 699 aaPredicted RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 USP4Q13107 963 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 GNL2Q13823 731 aaKnown RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 TMEM132DQ14C87 1099 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 NFE2Q16621 373 aaPredicted RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 LYSMD4Q5XG99 296 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 LRRTM3Q86VH5 581 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 EFCAB13Q8IY85 973 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 TMEFF1Q8IYR6 380 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 CCDC33Q8N5R6 958 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 OLIG1Q8TAK6 271 aa18.55■□□□□ 0.56
TOP3A-202ENST00000461127 ZSCAN31Q96LW9 406 aaPredicted RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 FOXP1Q9H334 677 aaPredicted RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 POLMQ9NP87 494 aaPredicted RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 NOL7Q9UMY1 257 aaKnown RBP18.55■□□□□ 0.56
TOP3A-202ENST00000461127 ANO9A1A5B4 782 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 EIF4E1BA6NMX2 242 aaKnown RBP18.54■□□□□ 0.56
TOP3A-202ENST00000461127 K7EQS6 105 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 OPHN1O60890 802 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 ADRB2P07550 413 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 PTGER3P43115 390 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 TAF6P49848 677 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 RPL10AP62906 217 aaKnown RBP18.54■□□□□ 0.56
TOP3A-202ENST00000461127 FSIP1Q8NA03 581 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 CEP76Q8TAP6 659 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 RLN3Q8WXF3 142 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 GTPBP2Q9BX10 602 aaKnown RBP18.54■□□□□ 0.56
TOP3A-202ENST00000461127 TMEM74BQ9NUR3 256 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 LARSQ9P2J5 1176 aaKnown RBP18.54■□□□□ 0.56
TOP3A-202ENST00000461127 SLC6A14Q9UN76 642 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 DERAQ9Y315 318 aa18.54■□□□□ 0.56
TOP3A-202ENST00000461127 TCHHQ07283 1943 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 SCN1AP35498 2009 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 SCAPQ12770 1279 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 DUOXA1Q1HG43 343 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 HSF5Q4G112 596 aaPredicted RBP18.53■□□□□ 0.56
TOP3A-202ENST00000461127 WSCD1Q658N2 575 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 RABEPKQ7Z6M1 372 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 RAB44Q7Z6P3 723 aaPredicted RBP18.53■□□□□ 0.56
TOP3A-202ENST00000461127 C4orf32Q8N8J7 132 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 SH3RF2Q8TEC5 729 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms