RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 MED7O43513 233 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 CLASP2O75122 1294 aaKnown RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 CCDC172P0C7W6 258 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 SSTR3P32745 418 aaPredicted RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 NRIP1P48552 1158 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 CLCN4P51793 760 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 ADKP55263 362 aaKnown RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 ADCY1Q08828 1119 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 SMARCB1Q12824 385 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 ADGRE1Q14246 886 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 TSR1Q2NL82 804 aaKnown RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 GOLGA7BQ2TAP0 167 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 TDRD12Q587J7 1177 aaKnown RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 PPP1R26Q5T8A7 1209 aaPredicted RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 TAF3Q5VWG9 929 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 E4F1Q66K89 784 aaPredicted RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 TPGS2Q68CL5 300 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 FUKQ8N0W3 1084 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 MICALL1Q8N3F8 863 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 ATAD1Q8NBU5 361 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 ZNF461Q8TAF7 563 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 SPPL2BQ8TCT7 592 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 C2orf15Q8WU43 125 aaKnown RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 TFAP2BQ92481 460 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 B3GNT5Q9BYG0 378 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 ZNF518BQ9C0D4 1074 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 KRT82Q9NSB4 513 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 ABHD10Q9NUJ1 306 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 LMCD1Q9NZU5 365 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 IMPACTQ9P2X3 320 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 HESX1Q9UBX0 185 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 AFF4Q9UHB7 1163 aaKnown RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 TSPAN16Q9UKR8 245 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 KIAA1257Q9ULG3 409 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 PRRC2BQ5JSZ5 2229 aaKnown RBP10.8□□□□□ -0.68
UPF2-204ENST00000460569 TRANK1O15050 2925 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 MYO16Q9Y6X6 1858 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 M0QYV0 167 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 PRRG1O14668 218 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 TGM5O43548 720 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 AP1G2O75843 785 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 ABLIM3O94929 683 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 VNN2O95498 520 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 SPATA31D3P0C874 917 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 FAM200BP0CF97 657 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 ATF2P15336 505 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 CYP11B1P15538 503 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 EPCAMP16422 314 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 KCNA4P22459 653 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 BDNFP23560 247 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 CYP2F1P24903 491 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 ELF1P32519 619 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 KLHL30Q0D2K2 578 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 STILQ15468 1287 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 DUSP6Q16828 381 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 MGAT5BQ3V5L5 792 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 CFAP221Q4G0U5 840 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 TCEAL5Q5H9L2 206 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 LIN9Q5TKA1 542 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 ARHGAP17Q68EM7 881 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 LLGL2Q6P1M3 1020 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 SPATA31D4Q6ZUB0 917 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 NOP9Q86U38 636 aaKnown RBP10.79□□□□□ -0.68
UPF2-204ENST00000460569 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 TTC9BQ8N6N2 239 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 KREMEN2Q8NCW0 462 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 OR8K1Q8NGG5 319 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 EPS8L1Q8TE68 723 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 SLC20A1Q8WUM9 679 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 ZNF606Q8WXB4 792 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 SYN2Q92777 582 aaPredicted RBP10.79□□□□□ -0.68
UPF2-204ENST00000460569 SMARCD1Q96GM5 515 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 FUBP3Q96I24 572 aaKnown RBP eCLIP10.79□□□□□ -0.68
UPF2-204ENST00000460569 DNAJC7Q99615 494 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 CDCA3Q99618 268 aaPredicted RBP10.79□□□□□ -0.68
UPF2-204ENST00000460569 SEPT5Q99719 369 aaPredicted RBP10.79□□□□□ -0.68
UPF2-204ENST00000460569 HNRNPABQ99729 332 aaKnown RBP10.79□□□□□ -0.68
UPF2-204ENST00000460569 ZSWIM1Q9BR11 485 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 PDCL3Q9H2J4 239 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 CRISPLD1Q9H336 500 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 IGFLR1Q9H665 355 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 CYP4F11Q9HBI6 524 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 ABCB6Q9NP58 842 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 ZNHIT6Q9NWK9 470 aaKnown RBP10.79□□□□□ -0.68
UPF2-204ENST00000460569 AIPL1Q9NZN9 384 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 NOCTQ9UK39 431 aaKnown RBP10.79□□□□□ -0.68
UPF2-204ENST00000460569 FBXW11Q9UKB1 542 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.79□□□□□ -0.68
UPF2-204ENST00000460569 MTCH2Q9Y6C9 303 aa10.79□□□□□ -0.68
UPF2-204ENST00000460569 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 MICAL2O94851 1124 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 SEC24AO95486 1093 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 HAPLN1P10915 354 aaPredicted RBP10.78□□□□□ -0.68
UPF2-204ENST00000460569 SKILP12757 684 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 NPR3P17342 541 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 GTF2F1P35269 517 aaKnown RBP eCLIP10.78□□□□□ -0.68
UPF2-204ENST00000460569 PRKCIP41743 596 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 MAGEA11P43364 429 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 BCAT1P54687 386 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms