RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 AGBL2Q5U5Z8 902 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 ATL2Q8NHH9 583 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 C18orf8Q96DM3 657 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 BTBD6Q96KE9 485 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 NT5C1AQ9BXI3 368 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 STMN4Q9H169 189 aaPredicted RBP14.89□□□□□ -0.03
ERCC3-205ENST00000460485 CYLDQ9NQC7 956 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 ZDHHC18Q9NUE0 388 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 CNTN3Q9P232 1028 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 NXF1Q9UBU9 619 aaKnown RBP14.89□□□□□ -0.03
ERCC3-205ENST00000460485 PRKAG2Q9UGJ0 569 aa14.89□□□□□ -0.03
ERCC3-205ENST00000460485 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.89□□□□□ -0.03
ERCC3-205ENST00000460485 TRIP12Q14669 1992 aaPredicted RBP14.88□□□□□ -0.03
ERCC3-205ENST00000460485 DYNC1LI2O43237 492 aaPredicted RBP14.88□□□□□ -0.03
ERCC3-205ENST00000460485 SHOX2O60902 331 aaPredicted RBP14.88□□□□□ -0.03
ERCC3-205ENST00000460485 GPR32O75388 356 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 IGHA2P01877 340 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 IVLP07476 585 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 FAM153BP0C7A2 387 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 RARAP10276 462 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 ITIH2P19823 946 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 PLA2G5P39877 138 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 SKOR1P84550 965 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 PPP1R7Q15435 360 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 FAM153CQ494X1 144 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 SCARA5Q6ZMJ2 495 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 ZDHHC17Q8IUH5 632 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 CCDC50Q8IVM0 306 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 CCDC89Q8N998 374 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 TTC13Q8NBP0 860 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 SLC4A11Q8NBS3 891 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 KIF12Q96FN5 646 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 SNF8Q96H20 258 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 CPB2Q96IY4 423 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 FAM84AQ96KN4 292 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 ATP6V1G3Q96LB4 118 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 GDAP1L1Q96MZ0 367 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 TXLNGYQ9BZA5 131 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 CELF4Q9BZC1 486 aaKnown RBP14.88□□□□□ -0.03
ERCC3-205ENST00000460485 OSBPL8Q9BZF1 889 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 TRIM6Q9C030 488 aaPredicted RBP14.88□□□□□ -0.03
ERCC3-205ENST00000460485 TTYH1Q9H313 450 aaPredicted RBP14.88□□□□□ -0.03
ERCC3-205ENST00000460485 SYNCQ9H7C4 482 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 CWC15Q9P013 229 aaKnown RBP14.88□□□□□ -0.03
ERCC3-205ENST00000460485 FAM153AQ9UHL3 310 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 AGAP1Q9UPQ3 857 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 PLAAQ9Y263 795 aa14.88□□□□□ -0.03
ERCC3-205ENST00000460485 C17orf102A2RUQ5 167 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 FOSL2P15408 326 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 SCNN1AP37088 669 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 CRYBB1P53674 252 aaPredicted RBP14.87□□□□□ -0.03
ERCC3-205ENST00000460485 NKX3-2P78367 333 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 DHX9Q08211 1270 aaKnown RBP14.87□□□□□ -0.03
ERCC3-205ENST00000460485 SHHQ15465 462 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 LCLAT1Q6UWP7 414 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 TRMT10CQ7L0Y3 403 aaKnown RBP14.87□□□□□ -0.03
ERCC3-205ENST00000460485 VSIG1Q86XK7 387 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 HACE1Q8IYU2 909 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 STK32AQ8WU08 396 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 MYLIPQ8WY64 445 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 KAT2BQ92831 832 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 ART4Q93070 314 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 MCRS1Q96EZ8 462 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 MCEEQ96PE7 176 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 TRIM51Q9BSJ1 452 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 DCLK3Q9C098 648 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 SENP6Q9GZR1 1112 aaPredicted RBP14.87□□□□□ -0.03
ERCC3-205ENST00000460485 DPH5Q9H2P9 285 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 SETD4Q9NVD3 440 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 NR2E1Q9Y466 385 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 NCOR1O75376 2440 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 SCN1AP35498 2009 aa14.87□□□□□ -0.03
ERCC3-205ENST00000460485 O00370 1275 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 DUSP11O75319 330 aaKnown RBP14.86□□□□□ -0.03
ERCC3-205ENST00000460485 NPTXRO95502 500 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 KRT1P04264 644 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 ERBB2P04626 1255 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 KRT3P12035 628 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 RARGP13631 454 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 KCNE1P15382 129 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 CCND3P30281 292 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-205ENST00000460485 LMAN1P49257 510 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 MRPS25P82663 173 aaKnown RBP14.86□□□□□ -0.03
ERCC3-205ENST00000460485 NFX1Q12986 1120 aaKnown RBP14.86□□□□□ -0.03
ERCC3-205ENST00000460485 XKR4Q5GH76 650 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 TFDP3Q5H9I0 405 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 DENND2CQ68D51 928 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 KDM7AQ6ZMT4 941 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 RSPH3Q86UC2 560 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 TMEM192Q8IY95 271 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 TFAP2BQ92481 460 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 TMEM109Q9BVC6 243 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 TRAIPQ9BWF2 469 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 PHACTR1Q9C0D0 580 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 PABPC3Q9H361 631 aaKnown RBP14.86□□□□□ -0.03
ERCC3-205ENST00000460485 SMYD3Q9H7B4 428 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 SPC25Q9HBM1 224 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 ASNSD1Q9NWL6 643 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 GRHL1Q9NZI5 618 aa14.86□□□□□ -0.03
ERCC3-205ENST00000460485 CHORDC1Q9UHD1 332 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms