RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 SLC7A5Q01650 507 aa18.32■□□□□ 0.52
CDK11A-209ENST00000460465 BFSP2Q13515 415 aa18.32■□□□□ 0.52
CDK11A-209ENST00000460465 JOSD2Q8TAC2 188 aa18.32■□□□□ 0.52
CDK11A-209ENST00000460465 NAP1L3Q99457 506 aaPredicted RBP18.32■□□□□ 0.52
CDK11A-209ENST00000460465 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
CDK11A-209ENST00000460465 METTL5Q9NRN9 209 aaKnown RBP18.32■□□□□ 0.52
CDK11A-209ENST00000460465 CCDC188H7C350 402 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 TULP2O00295 520 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 PIK3R2O00459 728 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 ZMYND10O75800 440 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 TUBBP07437 444 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 ADORA2BP29275 332 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 RGS7P49802 495 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 SLC24A5Q71RS6 500 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 ADAT2Q7Z6V5 191 aaKnown RBP18.31■□□□□ 0.52
CDK11A-209ENST00000460465 MCRS1Q96EZ8 462 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 DMGDHQ9UI17 866 aaKnown RBP18.31■□□□□ 0.52
CDK11A-209ENST00000460465 LCMT1Q9UIC8 334 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 E5RJQ4 531 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 SETSIPP0DME0 302 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 RFC1P35251 1148 aaPredicted RBP18.31■□□□□ 0.52
CDK11A-209ENST00000460465 CLUL1Q15846 466 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 GLE1Q53GS7 698 aaKnown RBP18.31■□□□□ 0.52
CDK11A-209ENST00000460465 CC2D1AQ6P1N0 951 aaPredicted RBP18.31■□□□□ 0.52
CDK11A-209ENST00000460465 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 DSTYKQ6XUX3 929 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
CDK11A-209ENST00000460465 TNIP3Q96KP6 325 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 ZNF446Q9NWS9 450 aa18.31■□□□□ 0.52
CDK11A-209ENST00000460465 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
CDK11A-209ENST00000460465 GABRDO14764 452 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 PSTPIP1O43586 416 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 NBNO60934 754 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 SEC31AO94979 1220 aaKnown RBP18.3■□□□□ 0.52
CDK11A-209ENST00000460465 FAM163BP0C2L3 166 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 ACAT1P24752 427 aaKnown RBP18.3■□□□□ 0.52
CDK11A-209ENST00000460465 SSR1P43307 286 aaKnown RBP18.3■□□□□ 0.52
CDK11A-209ENST00000460465 PMF1Q6P1K2 205 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 RHOT1Q8IXI2 618 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 B3GALNT2Q8NCR0 500 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 SLC35F5Q8WV83 523 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 HINFPQ9BQA5 517 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 DDX47Q9H0S4 455 aaKnown RBP18.3■□□□□ 0.52
CDK11A-209ENST00000460465 NR2E1Q9Y466 385 aa18.3■□□□□ 0.52
CDK11A-209ENST00000460465 F8VP50 259 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 INPPL1O15357 1258 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 PQBP1O60828 265 aaKnown RBP18.29■□□□□ 0.52
CDK11A-209ENST00000460465 ATP2C2O75185 946 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 EOMESO95936 686 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 TUSC3Q13454 348 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 PIGHQ14442 188 aaPredicted RBP18.29■□□□□ 0.52
CDK11A-209ENST00000460465 FAM183BPQ6ZVS7 135 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 SCN5AQ14524 2016 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 MCM3P25205 808 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 GJC1P36383 396 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 AARSP49588 968 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDK11A-209ENST00000460465 GPNMBQ14956 572 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 FAM102AQ5T9C2 384 aaPredicted RBP18.29■□□□□ 0.52
CDK11A-209ENST00000460465 OR6B2Q6IFH4 312 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 MTERF4Q7Z6M4 381 aaKnown RBP18.29■□□□□ 0.52
CDK11A-209ENST00000460465 TMEM86AQ8N2M4 240 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 EMC1Q8N766 993 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 NIPA2Q8N8Q9 360 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 ANKRD52Q8NB46 1076 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 SLC2A14Q8TDB8 520 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 FTHL17Q9BXU8 183 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 SLC4A5Q9BY07 1137 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 MIS12Q9H081 205 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 DDX43Q9NXZ2 648 aaKnown RBP18.29■□□□□ 0.52
CDK11A-209ENST00000460465 STIM2Q9P246 746 aa18.29■□□□□ 0.52
CDK11A-209ENST00000460465 TIMM13Q9Y5L4 95 aaPredicted RBP18.29■□□□□ 0.52
CDK11A-209ENST00000460465 RAD51CO43502 376 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 TCF4P15884 667 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 PSMA2P25787 234 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 TKTP29401 623 aaKnown RBP18.28■□□□□ 0.52
CDK11A-209ENST00000460465 ATN1P54259 1190 aaPredicted RBP18.28■□□□□ 0.52
CDK11A-209ENST00000460465 BCAT1P54687 386 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 FAM189BP81408 668 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 BST2Q10589 180 aaKnown RBP18.28■□□□□ 0.52
CDK11A-209ENST00000460465 CCDC142Q17RM4 750 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 PAN2Q504Q3 1202 aaKnown RBP18.28■□□□□ 0.52
CDK11A-209ENST00000460465 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 CLLU1OSQ5K130 101 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 GLB1LQ6UWU2 654 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 SLC13A5Q86YT5 568 aaPredicted RBP18.28■□□□□ 0.52
CDK11A-209ENST00000460465 PLVAPQ9BX97 442 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 ZMYND15Q9H091 742 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 PLEKHA4Q9H4M7 779 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 ARFGAP3Q9NP61 516 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 CEP350Q5VT06 3117 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 ERLIN1O75477 346 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 B3GAT3O94766 335 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 HSPA6P17066 643 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 PTPN1P18031 435 aaKnown RBP18.28■□□□□ 0.52
CDK11A-209ENST00000460465 KIAA0319Q5VV43 1072 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 FNIP1Q8TF40 1166 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 HNRNPLLQ8WVV9 542 aaKnown RBP18.28■□□□□ 0.52
CDK11A-209ENST00000460465 RUBCNQ92622 972 aa18.28■□□□□ 0.52
CDK11A-209ENST00000460465 UROC1Q96N76 676 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms