RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 SMARCD1Q96GM5 515 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 PCED1BQ96HM7 432 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 CCDC42Q96M95 316 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 PGLYRP2Q96PD5 576 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 LPIN3Q9BQK8 851 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 LMAN2LQ9H0V9 348 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 ZNF576Q9H609 170 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 NHEJ1Q9H9Q4 299 aaPredicted RBP11.35□□□□□ -0.59
CDHR4-203ENST00000460430 ARHGAP20Q9P2F6 1191 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 TSPAN16Q9UKR8 245 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDHR4-203ENST00000460430 PCDHB5Q9Y5E4 795 aa11.35□□□□□ -0.59
CDHR4-203ENST00000460430 COL4A4P53420 1690 aaPredicted RBP11.35□□□□□ -0.59
CDHR4-203ENST00000460430 TMEM265A0A087WTH1 108 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 SSU72P8A0A1W2PR75 194 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 TEX28O15482 410 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 ADAM12O43184 909 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 TBC1D4O60343 1298 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 AP1G2O75843 785 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 DNAJB1P25685 340 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 CYLC1P35663 651 aaPredicted RBP11.34□□□□□ -0.59
CDHR4-203ENST00000460430 KIF11P52732 1056 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 ERVFC1P60507 584 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 SMARCB1Q12824 385 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 GPR17Q13304 367 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 FAM171BQ6P995 826 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 RSPO2Q6UXX9 243 aaPredicted RBP11.34□□□□□ -0.59
CDHR4-203ENST00000460430 ZNF571Q7Z3V5 609 aaPredicted RBP11.34□□□□□ -0.59
CDHR4-203ENST00000460430 LRRC8AQ8IWT6 810 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 FUKQ8N0W3 1084 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 MSANTD4Q8NCY6 345 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 C2orf15Q8WU43 125 aaKnown RBP11.34□□□□□ -0.59
CDHR4-203ENST00000460430 NOX5Q96PH1 765 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 PKMYT1Q99640 499 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 SEPT5Q99719 369 aaPredicted RBP11.34□□□□□ -0.59
CDHR4-203ENST00000460430 HNRNPABQ99729 332 aaKnown RBP11.34□□□□□ -0.59
CDHR4-203ENST00000460430 ZSWIM1Q9BR11 485 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 B3GNT5Q9BYG0 378 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 ZNF518BQ9C0D4 1074 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 TMLHEQ9NVH6 421 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 FNIP2Q9P278 1114 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 PCDHGC3Q9UN70 934 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 PCDHGC5Q9Y5F6 944 aa11.34□□□□□ -0.59
CDHR4-203ENST00000460430 WDR27A2RRH5 827 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 MTMR11A4FU01 709 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 C2orf71A6NGG8 1288 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 EPOPA6NHQ4 379 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 SOWAHDA6NJG2 315 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 HIDE1A8MVS5 230 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 CLDN5O00501 218 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 FSCN2O14926 492 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 LSM8O95777 96 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 CNPP09543 421 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 SETSIPP0DME0 302 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 NPR3P17342 541 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 BDNFP23560 247 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 KLRC2P26717 231 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 ELF1P32519 619 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 IRS1P35568 1242 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 NSFP46459 744 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 FMO1Q01740 532 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 BST2Q10589 180 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 SPA17Q15506 151 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 CNGA2Q16280 664 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 MGAT5BQ3V5L5 792 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 TPGS2Q68CL5 300 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 DENND1BQ6P3S1 775 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 LCLAT1Q6UWP7 414 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 RNF19BQ6ZMZ0 732 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 LRRTM3Q86VH5 581 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 CCDC170Q8IYT3 715 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 MRPL43Q8N983 215 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 TMEM35BQ8NCS4 154 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 C1orf131Q8NDD1 294 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 SPPL2BQ8TCT7 592 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 IPO4Q8TEX9 1081 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 DDX1Q92499 740 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 SECISBP2LQ93073 1101 aaKnown RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 PPP2R3CQ969Q6 453 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 TRIM44Q96DX7 344 aaPredicted RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 FUBP3Q96I24 572 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 CHP1Q99653 195 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 CLSTN3Q9BQT9 956 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 RHOBTB2Q9BYZ6 727 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 SYNCQ9H7C4 482 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 RXFP1Q9HBX9 757 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 DMAP1Q9NPF5 467 aaPredicted RBP11.33□□□□□ -0.6
CDHR4-203ENST00000460430 ADAMTS1Q9UHI8 967 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 IRAK3Q9Y616 596 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 CHD9Q3L8U1 2897 aa11.33□□□□□ -0.6
CDHR4-203ENST00000460430 FAM170AA1A519 330 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 TMCO5BA8MYB1 307 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 PRRG1O14668 218 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 TRIM66O15016 1216 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 ARHGAP6O43182 974 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms