RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 FNTAP49354 379 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 RNASE9P60153 205 aaKnown RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 PSMC1P62191 440 aaKnown RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 NFX1Q12986 1120 aaKnown RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 PAK2Q13177 524 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 ZNF211Q13398 564 aaPredicted RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 CASP8Q14790 479 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 PTPROQ16827 1216 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 ZNF618Q5T7W0 954 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 PPP1R26Q5T8A7 1209 aaPredicted RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 DRICH1Q6PGQ1 229 aaPredicted RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 DCUN1D2Q6PH85 259 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 TTC30AQ86WT1 665 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 ZNF784Q8NCA9 323 aaPredicted RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 APPL2Q8NEU8 664 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 IPO4Q8TEX9 1081 aaKnown RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 CASKIN2Q8WXE0 1202 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 KHSRPQ92945 711 aaKnown RBP eCLIP8.5□□□□□ -1.054e-18■■□□□ 12.7
SFPQ-202ENST00000460428 TNIP3Q96KP6 325 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 HSFY1Q96LI6 401 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 UROC1Q96N76 676 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 HNRNPABQ99729 332 aaKnown RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 NCAPGQ9BPX3 1015 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 APOL6Q9BWW8 343 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 AP1M1Q9BXS5 423 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 OSBPL7Q9BZF2 842 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 FAM129AQ9BZQ8 928 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 EPB41L5Q9HCM4 733 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 RGS18Q9NS28 235 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 MIOSQ9NXC5 875 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 DDX56Q9NY93 547 aaKnown RBP8.5□□□□□ -1.05
SFPQ-202ENST00000460428 MTUS1Q9ULD2 1270 aa8.5□□□□□ -1.05
SFPQ-202ENST00000460428 A0A1W2PQ45 241 aaPredicted RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 A0A1W2PQY0 241 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ARL5CA6NH57 179 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 C2CD4BA6NLJ0 364 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 MEIS3P2A8K0S8 358 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 A8MXQ7 604 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 M0QYV0 167 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 DNM1LO00429 736 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 MGEA5O60502 916 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 GABBR2O75899 941 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ENDOD1O94919 500 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 CYP11A1P05108 521 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 CTSHP09668 335 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 RARAP10276 462 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 LMO2P25791 158 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ECHS1P30084 290 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 CD52P31358 61 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 PCK1P35558 622 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 COILP38432 576 aaPredicted RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 CETN2P41208 172 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ACADSBP45954 432 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 LHX1P48742 406 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ZNF143P52747 638 aaPredicted RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 SLC7A5Q01650 507 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 GUCY2DQ02846 1103 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 SLC25A11Q02978 314 aaKnown RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 GRIK3Q13003 919 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 CCNG2Q16589 344 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 UPP1Q16831 310 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 SPDYCQ5MJ68 293 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 DUPD1Q68J44 220 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 AADACL2Q6P093 401 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 SYDE1Q6ZW31 735 aaPredicted RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ACOT1Q86TX2 421 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 OSTM1Q86WC4 334 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 VSIG1Q86XK7 387 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 KLHL7Q8IXQ5 586 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ARFGAP1Q8N6T3 406 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 C12orf29Q8N999 325 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 CMASQ8NFW8 434 aaPredicted RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 KCTD13Q8WZ19 329 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 RBM41Q96IZ5 413 aaKnown RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 PKNOX2Q96KN3 472 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ZFP42Q96MM3 310 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 MCEEQ96PE7 176 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 GAD1Q99259 594 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 ERP44Q9BS26 406 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 FTHL17Q9BXU8 183 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 RAB17Q9H0T7 212 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 RSAD1Q9HA92 442 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 PAK6Q9NQU5 681 aaPredicted RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 FAM114A2Q9NRY5 505 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 TRMT13Q9NUP7 481 aaKnown RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 AMACRQ9UHK6 382 aa8.49□□□□□ -1.05
SFPQ-202ENST00000460428 FEZ2Q9UHY8 353 aaPredicted RBP8.49□□□□□ -1.05
SFPQ-202ENST00000460428 C9IYK1 514 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 F8VP50 259 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 M0QZQ0 153 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 CYB561D2O14569 222 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 XPO1O14980 1071 aaKnown RBP8.48□□□□□ -1.05
SFPQ-202ENST00000460428 LRCH4O75427 683 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 ZMYND10O75800 440 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 KRT7P08729 469 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 GHRP10912 638 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 MLH1P40692 756 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 CARSP49589 748 aaKnown RBP8.48□□□□□ -1.05
SFPQ-202ENST00000460428 BCAT1P54687 386 aa8.48□□□□□ -1.05
SFPQ-202ENST00000460428 SLC6A3Q01959 620 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms