RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 ATP5OP48047 213 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SLC26A2P50443 739 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 CCNHP51946 323 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 AP3M2P53677 418 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 NLRP11P59045 1033 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 FKBP1BP68106 108 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 MRPS9P82933 396 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 ITGB3BPQ13352 177 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 BLMHQ13867 455 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 MXD4Q14582 209 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 EMC2Q15006 297 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 MEA1Q16626 185 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SNX30Q5VWJ9 437 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 B3GNT6Q6ZMB0 384 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 TMCO5AQ8N6Q1 288 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 METTL13Q8N6R0 699 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 MAB21L3Q8N8X9 362 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 TTC16Q8NEE8 873 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 GIPC2Q8TF65 315 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SCFD2Q8WU76 684 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 EZH1Q92800 747 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 P2RX7Q99572 595 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 STK33Q9BYT3 514 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 GCOM2Q9BZD3 368 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 KCTD10Q9H3F6 313 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 RMI1Q9H9A7 625 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 DMGDHQ9UI17 866 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 UCHL3P15374 230 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 MAP3K7CLP57077 242 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 GHRHRQ02643 423 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 LONRF1Q17RB8 773 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 LBX2Q6XYB7 198 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 LRRC74BQ6ZQY2 392 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 PARD3BQ8TEW8 1205 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 DEPDC1BQ8WUY9 529 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SPATA33Q96N06 139 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 MED15Q96RN5 788 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 POLD4Q9HCU8 107 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 UBE2TQ9NPD8 197 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 CNGB3Q9NQW8 809 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 PRDM5Q9NQX1 630 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 TBX20Q9UMR3 447 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 PHTF1Q9UMS5 762 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 FOCADQ5VW36 1801 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SPATA31C2B4DYI2 1134 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 TNNC2P02585 160 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 MYBL2P10244 700 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 P4HA1P13674 534 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 PEX5P50542 639 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 CCDC15Q0P6D6 951 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 SLC29A2Q14542 456 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 MIIPQ5JXC2 388 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 TMCO4Q5TGY1 634 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 KLHDC7AQ5VTJ3 777 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 PLA2G4FQ68DD2 849 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 NLRP9Q7RTR0 991 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 GPR141Q7Z602 305 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 ZBTB33Q86T24 672 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 SLC9A9Q8IVB4 645 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 REM2Q8IYK8 340 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-202ENST00000460333 IL31RAQ8NI17 732 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 BLOC1S6Q9UL45 172 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 L3MBTL1Q9Y468 752 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 SCN9AQ15858 1988 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 GLTPD2A6NH11 291 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 CBFA2T3O75081 653 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 SPAG6O75602 509 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 TMEM253P0C7T8 217 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 TXNP10599 105 aaKnown RBP6.47□□□□□ -1.37
VPS13D-202ENST00000460333 SOX5P35711 763 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 PSEN1P49768 467 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 DEFA1P59665 94 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 DEFA3P59666 94 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 ZNF844Q08AG5 666 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 ITGA9Q13797 1035 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 CYTH1Q15438 398 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 MAPK6Q16659 721 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 IER5Q5VY09 327 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 METTL7BQ6UX53 244 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 ZNF554Q86TJ5 538 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 HORMAD1Q86X24 394 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 PASD1Q8IV76 773 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 ZNF184Q99676 751 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-202ENST00000460333 SH3GL2Q99962 352 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 ADPGKQ9BRR6 497 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 THTPAQ9BU02 230 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 MSTO1Q9BUK6 570 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 DDX28Q9NUL7 540 aaKnown RBP6.47□□□□□ -1.37
VPS13D-202ENST00000460333 HAO1Q9UJM8 370 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 SNCAIPQ9Y6H5 919 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 ZNF839A8K0R7 811 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 KPNA4O00629 521 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-202ENST00000460333 GNGT2O14610 69 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 CLASP2O75122 1294 aaKnown RBP6.47□□□□□ -1.37
VPS13D-202ENST00000460333 SUPT3HO75486 399 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 KRT16P08779 473 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 CHRM1P11229 460 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-202ENST00000460333 GARTP22102 1010 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 GTF2H1P32780 548 aa6.47□□□□□ -1.37
VPS13D-202ENST00000460333 PIK3CAP42336 1068 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms