RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 NTHL1P78549 312 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 GCNT1Q02742 428 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 CBX2Q14781 532 aaPredicted RBP13.66□□□□□ -0.22
COL18A1-206ENST00000459895 CFAP221Q4G0U5 840 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 ZNF394Q53GI3 561 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 ATXN2LQ8WWM7 1075 aaKnown RBP13.66□□□□□ -0.22
COL18A1-206ENST00000459895 FUBP3Q96I24 572 aaKnown RBP eCLIP13.66□□□□□ -0.22
COL18A1-206ENST00000459895 TNIP3Q96KP6 325 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 LSM14BQ9BX40 385 aaKnown RBP13.66□□□□□ -0.22
COL18A1-206ENST00000459895 PRKD2Q9BZL6 878 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 ABCB6Q9NP58 842 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 KRT82Q9NSB4 513 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 APEX2Q9UBZ4 518 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 MAFFQ9ULX9 164 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 ZNF638Q14966 1978 aaKnown RBP13.65□□□□□ -0.22
COL18A1-206ENST00000459895 DOCK8Q8NF50 2099 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 NRG2O14511 850 aaPredicted RBP13.65□□□□□ -0.22
COL18A1-206ENST00000459895 TPM2P07951 284 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 SP100P23497 879 aaPredicted RBP13.65□□□□□ -0.22
COL18A1-206ENST00000459895 CYP2F1P24903 491 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 RAD23BP54727 409 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 MRPS5P82675 430 aaKnown RBP13.65□□□□□ -0.22
COL18A1-206ENST00000459895 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 PLD1Q13393 1074 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 MAPRE1Q15691 268 aaKnown RBP13.65□□□□□ -0.22
COL18A1-206ENST00000459895 SMAD2Q15796 467 aaKnown RBP13.65□□□□□ -0.22
COL18A1-206ENST00000459895 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 SDHAF4Q5VUM1 108 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 CES5AQ6NT32 575 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 DPY19L2P1Q6NXN4 242 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 FUKQ8N0W3 1084 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 C12orf29Q8N999 325 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 SLC4A11Q8NBS3 891 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 SLC2A14Q8TDB8 520 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 GPR152Q8TDT2 470 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 NT5C1AQ9BXI3 368 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 B3GNT5Q9BYG0 378 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 GANQ9H2C0 597 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 CEP72Q9P209 647 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 HSFX1Q9UBD0 423 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 FHOD1Q9Y613 1164 aa13.65□□□□□ -0.22
COL18A1-206ENST00000459895 KIF26AQ9ULI4 1882 aaPredicted RBP13.65□□□□□ -0.22
COL18A1-206ENST00000459895 EPHB6O15197 1021 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 XYLBO75191 536 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 CAVIN2O95810 425 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 CALCAP01258 141 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 PNMA6AP0CW24 399 aaPredicted RBP13.64□□□□□ -0.23
COL18A1-206ENST00000459895 BDNFP23560 247 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 ADORA2BP29275 332 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 MTHFRP42898 656 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 MAGEA11P43364 429 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 ZNF132P52740 706 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 YWHAEP62258 255 aaKnown RBP13.64□□□□□ -0.23
COL18A1-206ENST00000459895 PTPN21Q16825 1174 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 SLC5A9Q2M3M2 681 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 PAQR9Q6ZVX9 377 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 GET4Q7L5D6 327 aaPredicted RBP13.64□□□□□ -0.23
COL18A1-206ENST00000459895 GRASPQ7Z6J2 395 aaPredicted RBP13.64□□□□□ -0.23
COL18A1-206ENST00000459895 TMC8Q8IU68 726 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 RBBP8NLQ8NC74 664 aaPredicted RBP13.64□□□□□ -0.23
COL18A1-206ENST00000459895 RNF214Q8ND24 703 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 FAM124BQ9H5Z6 455 aaPredicted RBP13.64□□□□□ -0.23
COL18A1-206ENST00000459895 PIDD1Q9HB75 910 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 ZNF334Q9HCZ1 680 aaPredicted RBP13.64□□□□□ -0.23
COL18A1-206ENST00000459895 DNMT3BQ9UBC3 853 aaKnown RBP13.64□□□□□ -0.23
COL18A1-206ENST00000459895 SIK3Q9Y2K2 1263 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 ATP8B3O60423 1300 aa13.64□□□□□ -0.23
COL18A1-206ENST00000459895 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 CDK11BP21127 795 aaKnown RBP13.63□□□□□ -0.23
COL18A1-206ENST00000459895 ALDH1A3P47895 512 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 SYCP1Q15431 976 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 DDR2Q16832 855 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 PUS10Q3MIT2 529 aaKnown RBP13.63□□□□□ -0.23
COL18A1-206ENST00000459895 PABPC1LQ4VXU2 614 aaKnown RBP13.63□□□□□ -0.23
COL18A1-206ENST00000459895 FKBP15Q5T1M5 1219 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 IQCEQ6IPM2 695 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 TMEM270Q6UE05 265 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 RTL10Q7L3V2 364 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 SCN4BQ8IWT1 228 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 HS6ST3Q8IZP7 471 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 CRYBG2Q8N1P7 616 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 TTC39CQ8N584 583 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 GIPC2Q8TF65 315 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 SMARCD1Q96GM5 515 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 TMEM176AQ96HP8 235 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 NECTIN4Q96NY8 510 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 CORO1BQ9BR76 489 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 MED10Q9BTT4 135 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 GPR88Q9GZN0 384 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 WDR6Q9NNW5 1121 aaKnown RBP13.63□□□□□ -0.23
COL18A1-206ENST00000459895 UBE2TQ9NPD8 197 aaPredicted RBP13.63□□□□□ -0.23
COL18A1-206ENST00000459895 PCDHB4Q9Y5E5 795 aa13.63□□□□□ -0.23
COL18A1-206ENST00000459895 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms