RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CHORDC1Q9UHD1 332 aaPredicted RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 G3BP2Q9UN86 482 aaKnown RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 EPN1Q9Y6I3 576 aaPredicted RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 COL4A6Q14031 1691 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 LCHNA4D1U4 455 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 AKR1B10O60218 316 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 PPFIA2O75334 1257 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 CILPO75339 1184 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 NDUFA10O95299 355 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 MYOGP15173 224 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 CD19P15391 556 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 RFX1P22670 979 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 DNAJB2P25686 324 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 RABGGTBP53611 331 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 CCDC15Q0P6D6 951 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 SV2CQ496J9 727 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 DSTYKQ6XUX3 929 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 ENOSF1Q7L5Y1 443 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 PHLDB2Q86SQ0 1253 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 SLC4A11Q8NBS3 891 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 ZNF560Q96MR9 790 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 GPR62Q9BZJ7 368 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 DEF6Q9H4E7 631 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 CWH43Q9H720 699 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 FAM49BQ9NUQ9 324 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 MARCH5Q9NX47 278 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 GDAP2Q9NXN4 497 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 USTQ9Y2C2 406 aa10.96□□□□□ -0.65
USP39-210ENST00000459775 PDCD11Q14690 1871 aaKnown RBP10.96□□□□□ -0.66
USP39-210ENST00000459775 ARHGAP6O43182 974 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 STAU1O95793 577 aaKnown RBP10.96□□□□□ -0.66
USP39-210ENST00000459775 GALTP07902 379 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 GNA15P30679 374 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 RPL9P32969 192 aaKnown RBP10.96□□□□□ -0.66
USP39-210ENST00000459775 PRKCIP41743 596 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 KCNJ6P48051 423 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 MRPS5P82675 430 aaKnown RBP10.96□□□□□ -0.66
USP39-210ENST00000459775 FMO1Q01740 532 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 ADGRF2Q8IZF7 708 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 APPL2Q8NEU8 664 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 SLC30A5Q8TAD4 765 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 KIAA1524Q8TCG1 905 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 TIFAQ96CG3 184 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 ASB2Q96Q27 587 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 TMEM209Q96SK2 561 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 AGPAT1Q99943 283 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 KANSL3Q9P2N6 904 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 MYO6Q9UM54 1294 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 RABL2BQ9UNT1 228 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 CNTN6Q9UQ52 1028 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 ADGRG1Q9Y653 693 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 MRPL42Q9Y6G3 142 aaKnown RBP10.96□□□□□ -0.66
USP39-210ENST00000459775 DUSP10Q9Y6W6 482 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 MICAL3Q7RTP6 2002 aa10.96□□□□□ -0.66
USP39-210ENST00000459775 CCDC66A2RUB6 948 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 CARNS1A5YM72 827 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 A8MXQ7 604 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 THAP12O43422 761 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 HUS1O60921 280 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 CSPG5O95196 566 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 TKTP29401 623 aaKnown RBP10.95□□□□□ -0.66
USP39-210ENST00000459775 GNL1P36915 607 aaPredicted RBP10.95□□□□□ -0.66
USP39-210ENST00000459775 PNPLA4P41247 253 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 CDK17Q00537 523 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 WASHC5Q12768 1159 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 BTG3Q14201 252 aaPredicted RBP10.95□□□□□ -0.66
USP39-210ENST00000459775 HS1BP3Q53T59 392 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 SPOUT1Q5T280 376 aaKnown RBP10.95□□□□□ -0.66
USP39-210ENST00000459775 DCLRE1AQ6PJP8 1040 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 CCDC112Q8NEF3 446 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 ZNF606Q8WXB4 792 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 ZNF689Q96CS4 500 aaPredicted RBP10.95□□□□□ -0.66
USP39-210ENST00000459775 HEXIM2Q96MH2 286 aaKnown RBP10.95□□□□□ -0.66
USP39-210ENST00000459775 YME1L1Q96TA2 773 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 RTP3Q9BQQ7 232 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 ZNF576Q9H609 170 aa10.95□□□□□ -0.66
USP39-210ENST00000459775 RC3H2Q9HBD1 1191 aaKnown RBP10.95□□□□□ -0.66
USP39-210ENST00000459775 BARX2Q9UMQ3 279 aaPredicted RBP10.95□□□□□ -0.66
USP39-210ENST00000459775 TADA2AO75478 443 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 ARHGEF15O94989 841 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 ALDH2P05091 517 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 PFKMP08237 780 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 P4HA1P13674 534 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 PDE6CP51160 858 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 LLGL2Q6P1M3 1020 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 LIMS2Q7Z4I7 341 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 CEP57Q86XR8 500 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 MYO1HQ8N1T3 1032 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 PHC3Q8NDX5 983 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 UBA3Q8TBC4 463 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 CPA5Q8WXQ8 436 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 CYFIP2Q96F07 1278 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 DDX27Q96GQ7 796 aaKnown RBP10.94□□□□□ -0.66
USP39-210ENST00000459775 TMEM176AQ96HP8 235 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 ZBED2Q9BTP6 218 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 VN1R3Q9BXE9 311 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 RHOBTB2Q9BYZ6 727 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 IRX2Q9BZI1 471 aaPredicted RBP10.94□□□□□ -0.66
USP39-210ENST00000459775 LACRTQ9GZZ8 138 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 CYP3A43Q9HB55 503 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms