RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MAK16Q9BXY0 300 aaKnown RBP9.29□□□□□ -0.92
HDAC3-202ENST00000459727 HAPLN2Q9GZV7 340 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 MTFR1LQ9H019 292 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 FZD8Q9H461 694 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 ACSS3Q9H6R3 686 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 SPON1Q9HCB6 807 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 GPRC5DQ9NZD1 345 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 PRKAG3Q9UGI9 489 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 ITGA11Q9UKX5 1188 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 FARP1Q9Y4F1 1045 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-202ENST00000459727 IKBKGQ9Y6K9 419 aa9.29□□□□□ -0.92
HDAC3-202ENST00000459727 COL11A1P12107 1806 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ASB14A6NK59 587 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ABLIM1O14639 778 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ATP6V1G2O95670 118 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ASMTLO95671 621 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ATP5BP06576 529 aaKnown RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 HOXC6P09630 235 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 CCNB1P14635 433 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 CD19P15391 556 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 TAC1P20366 129 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 TGM2P21980 687 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 CCND1P24385 295 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 MAP2K2P36507 400 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 IREB2P48200 963 aaKnown RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 CTCFP49711 727 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 WNT7BP56706 349 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 RPL7AP62424 266 aaKnown RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 SLC25A11Q02978 314 aaKnown RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ZNF252P-AS1Q0IIN9 211 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 PDIA2Q13087 525 aaKnown RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 KCTD2Q14681 263 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 PDK2Q15119 407 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 PARP6Q2NL67 630 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 HHATQ5VTY9 493 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 NCAPG2Q86XI2 1143 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ZDHHC17Q8IUH5 632 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ZBED8Q8IZ13 594 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 GPC2Q8N158 579 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 SLC4A11Q8NBS3 891 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 KCTD6Q8NC69 237 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 CMASQ8NFW8 434 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 SH3TC2Q8TF17 1288 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 TEKT4Q8WW24 435 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 LRRC39Q96DD0 335 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 C9orf72Q96LT7 481 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 TMEM237Q96Q45 408 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 CYTH2Q99418 400 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 GPR20Q99678 358 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 CNPY3Q9BT09 278 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 XYLT2Q9H1B5 865 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 MROH8Q9H579 483 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ECT2Q9H8V3 914 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 PTPRHQ9HD43 1115 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ERAP1Q9NZ08 941 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 GGA3Q9NZ52 723 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 PAK5Q9P286 719 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 DERAQ9Y315 318 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 C2CD2Q9Y426 696 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 SNCAIPQ9Y6H5 919 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 ZNFX1Q9P2E3 1918 aaKnown RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 WDR90Q96KV7 1748 aa9.28□□□□□ -0.92
HDAC3-202ENST00000459727 BRCA1P38398 1863 aaKnown RBP9.28□□□□□ -0.92
HDAC3-202ENST00000459727 WDR81Q562E7 1941 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 MYH9P35579 1960 aaKnown RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 E7ENQ6 273 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 F8VP50 259 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 DPYSL4O14531 572 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 CHADO15335 359 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 LRCH4O75427 683 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 FAM155BO75949 473 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ECM2O94769 699 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 UBOX5O94941 541 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 UNC5CO95185 931 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 EGFRP00533 1210 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 IFNB1P01574 187 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 IL1BP01584 269 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 KRT10P13645 584 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ZFXP17010 805 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 OSBPP22059 807 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 CA4P22748 312 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 KDELR1P24390 212 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 SCNN1AP37088 669 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 MSH2P43246 934 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF143P52747 638 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 NCALDP61601 193 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 CDC42EP1Q00587 391 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 OTUD4Q01804 1114 aaKnown RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ROR1Q01973 937 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 CNTN2Q02246 1040 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 PTPN11Q06124 597 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 TTLL4Q14679 1199 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 LRRC14Q15048 493 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 PCBP1Q15365 356 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 DBN1Q16643 649 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 PTPN20Q4JDL3 420 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 FAM133BQ5BKY9 247 aaKnown RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ZBTB41Q5SVQ8 909 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ADGRD1Q6QNK2 874 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms