RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 FAM193BQ96PV7 902 aaPredicted RBP25.82■■□□□ 1.72
U2AF1-204ENST00000459639 SYNCQ9H7C4 482 aa25.82■■□□□ 1.72
U2AF1-204ENST00000459639 KCNK3O14649 394 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 DDX3YO15523 660 aaKnown RBP25.81■■□□□ 1.72
U2AF1-204ENST00000459639 B4GALT3O60512 393 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 CCDC130P13994 396 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 BCAT1P54687 386 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 ZNF268Q14587 947 aaPredicted RBP25.81■■□□□ 1.72
U2AF1-204ENST00000459639 PPP1R15BQ5SWA1 713 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 CYP4A22Q5TCH4 519 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 CNKSR3Q6P9H4 555 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 ZNF572Q7Z3I7 529 aaPredicted RBP25.81■■□□□ 1.72
U2AF1-204ENST00000459639 ANKRD52Q8NB46 1076 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 SUSD3Q96L08 255 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 CASD1Q96PB1 797 aa25.81■■□□□ 1.72
U2AF1-204ENST00000459639 KIAA0100Q14667 2235 aaKnown RBP25.81■■□□□ 1.72
U2AF1-204ENST00000459639 ERBB2P04626 1255 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 PTPN1P18031 435 aaKnown RBP25.8■■□□□ 1.72
U2AF1-204ENST00000459639 SLC1A1P43005 524 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 BRCC3P46736 316 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 PSMC1P62191 440 aaKnown RBP25.8■■□□□ 1.72
U2AF1-204ENST00000459639 BST2Q10589 180 aaKnown RBP25.8■■□□□ 1.72
U2AF1-204ENST00000459639 PAN2Q504Q3 1202 aaKnown RBP25.8■■□□□ 1.72
U2AF1-204ENST00000459639 CCDC181Q5TID7 509 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 METTL23Q86XA0 190 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 XYLT1Q86Y38 959 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 STK32AQ8WU08 396 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 CD101Q93033 1021 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 LPIN3Q9BQK8 851 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 SPOPO43791 374 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 PROSCO94903 275 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 PCSK1P29120 753 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 SLC35F5Q8WV83 523 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 GOLGA1Q92805 767 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 HNRNPABQ99729 332 aaKnown RBP25.8■■□□□ 1.72
U2AF1-204ENST00000459639 SYT15Q9BQS2 421 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 SELENOOQ9BVL4 669 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 MRPL9Q9BYD2 267 aaKnown RBP25.8■■□□□ 1.72
U2AF1-204ENST00000459639 TRIM7Q9C029 511 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 TJP2Q9UDY2 1190 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 CDH9Q9ULB4 789 aa25.8■■□□□ 1.72
U2AF1-204ENST00000459639 TMEM191CA6NGB0 347 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 PDE2AO00408 941 aaPredicted RBP25.79■■□□□ 1.72
U2AF1-204ENST00000459639 TYMPP19971 482 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 ACAT1P24752 427 aaKnown RBP25.79■■□□□ 1.72
U2AF1-204ENST00000459639 CTNNA2P26232 953 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 ADORA2BP29275 332 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 MAN1A1P33908 653 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 PAFAH1B1P43034 410 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 SNX16P57768 344 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 TUBB4BP68371 445 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 CFAP221Q4G0U5 840 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 UBL4BQ8N7F7 174 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 SLC2A14Q8TDB8 520 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 HASPINQ8TF76 798 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 MCRS1Q96EZ8 462 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 IP6K2Q9UHH9 426 aa25.79■■□□□ 1.72
U2AF1-204ENST00000459639 TIMM13Q9Y5L4 95 aaPredicted RBP25.79■■□□□ 1.72
U2AF1-204ENST00000459639 I3L4J1 428 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 ITGB1P05556 798 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 PDE4CQ08493 712 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 IKBKEQ14164 716 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 DCUN1D2Q6PH85 259 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 RSRC2Q7L4I2 434 aaKnown RBP25.78■■□□□ 1.72
U2AF1-204ENST00000459639 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.78■■□□□ 1.72
U2AF1-204ENST00000459639 MCEEQ96PE7 176 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 SLC4A5Q9BY07 1137 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 CARD9Q9H257 536 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 CYLDQ9NQC7 956 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 ST7Q9NRC1 585 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 PCDHB8Q9UN66 801 aa25.78■■□□□ 1.72
U2AF1-204ENST00000459639 CCDC66A2RUB6 948 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 SIGLEC16A6NMB1 481 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 KIAA0355O15063 1070 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 ATP2C2O75185 946 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 GJB6O95452 261 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 CTNNA1P35221 906 aaKnown RBP25.77■■□□□ 1.72
U2AF1-204ENST00000459639 OR1G1P47890 313 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 RPL7AP62424 266 aaKnown RBP25.77■■□□□ 1.72
U2AF1-204ENST00000459639 ITIH3Q06033 890 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 KIAA0319Q5VV43 1072 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 FUKQ8N0W3 1084 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 UBXN4Q92575 508 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 DYNC1I1O14576 645 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 TIMP1P01033 207 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 TKTP29401 623 aaKnown RBP25.77■■□□□ 1.72
U2AF1-204ENST00000459639 MDH1BQ5I0G3 518 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 PMF1Q6P1K2 205 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 VWCEQ96DN2 955 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 NRDE2Q9H7Z3 1164 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 CRTAC1Q9NQ79 661 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 DNAJB4Q9UDY4 337 aa25.77■■□□□ 1.72
U2AF1-204ENST00000459639 E5RJQ4 531 aa25.76■■□□□ 1.71
U2AF1-204ENST00000459639 GOLGA8SH3BPF8 625 aa25.76■■□□□ 1.71
U2AF1-204ENST00000459639 KRT3P12035 628 aa25.76■■□□□ 1.71
U2AF1-204ENST00000459639 GATMP50440 423 aa25.76■■□□□ 1.71
U2AF1-204ENST00000459639 PLCB3Q01970 1234 aa25.76■■□□□ 1.71
U2AF1-204ENST00000459639 TMEM110Q86TL2 294 aa25.76■■□□□ 1.71
U2AF1-204ENST00000459639 RTP3Q9BQQ7 232 aa25.76■■□□□ 1.71
U2AF1-204ENST00000459639 ACBD6Q9BR61 282 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms