RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CYP11A1P05108 521 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 URODP06132 367 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 CTAGE8P0CG41 777 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 PRLRP16471 622 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 EN2P19622 333 aaPredicted RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 GBP1P32455 592 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 ARPP19P56211 112 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 BCAR1P56945 870 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 RNASE9P60153 205 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 RPL10AP62906 217 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 SOX4Q06945 474 aaPredicted RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 WHAMMP3Q1A5X7 153 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 TIGD5Q53EQ6 642 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 MDH1BQ5I0G3 518 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 FAM102AQ5T9C2 384 aaPredicted RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 ARHGAP17Q68EM7 881 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 FAM117BQ6P1L5 589 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 MMS22LQ6ZRQ5 1243 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 OTOP2Q7RTS6 562 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 CTAGE6Q86UF2 777 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 RTN4RL1Q86UN2 441 aaPredicted RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 CCDC50Q8IVM0 306 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 CTAGE4Q8IX94 777 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 COLGALT2Q8IYK4 626 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 ELMOD1Q8N336 334 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC35F6Q8N357 371 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 ARHGAP18Q8N392 663 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC4A11Q8NBS3 891 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 UBA3Q8TBC4 463 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 FEZF2Q8TBJ5 459 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 MYCBPAPQ8TBZ2 947 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 PHOSPHO2Q8TCD6 241 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 HASPINQ8TF76 798 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 UBXN4Q92575 508 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 ELMO3Q96BJ8 720 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 FAM149B1Q96BN6 582 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 HSFY1Q96LI6 401 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 CASD1Q96PB1 797 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 HNRNPABQ99729 332 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 MRPL45Q9BRJ2 306 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 TTPALQ9BTX7 342 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 MAK16Q9BXY0 300 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 DUSP16Q9BY84 665 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 GPR88Q9GZN0 384 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 FBXO44Q9H4M3 255 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 DMAP1Q9NPF5 467 aaPredicted RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 MRPL17Q9NRX2 175 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 RNF19AQ9NV58 838 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 ARGLU1Q9NWB6 273 aaPredicted RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 MIOSQ9NXC5 875 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 DDX56Q9NY93 547 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 DPP7Q9UHL4 492 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 FEZ2Q9UHY8 353 aaPredicted RBP6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 PCDHB5Q9Y5E4 795 aa6.16□□□□□ -1.42
RNU1-88P-201ENST00000459274 SIGLEC16A6NMB1 481 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 O00370 1275 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 KCNK3O14649 394 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 XPO1O14980 1071 aaKnown RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 TLL1O43897 1013 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 AP1G2O75843 785 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 DGKIO75912 1065 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 RTN3O95197 1032 aaPredicted RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 F9P00740 461 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 CYP1A2P05177 515 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 TUBBP07437 444 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 KRT7P08729 469 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 ACRP10323 421 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 UNGP13051 313 aaPredicted RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 LCP1P13796 627 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 NPR3P17342 541 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 MMP8P22894 467 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 PSMA2P25787 234 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 CTNNA2P26232 953 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 SDC4P31431 198 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 BRCC3P46736 316 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 TUFMP49411 452 aaKnown RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZNF132P52740 706 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 HADHBP55084 474 aaKnown RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 RWDD2BP57060 319 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 NOMO3P69849 1222 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 PLCB3Q01970 1234 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 DSC1Q08554 894 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 MBTPS1Q14703 1052 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 VEPH1Q14D04 833 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 ARL13BQ3SXY8 428 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 CLLU1OSQ5K130 101 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 PPP1R26Q5T8A7 1209 aaPredicted RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 C11orf63Q6NUN7 778 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 DPY19L2P1Q6NXN4 242 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 FUT10Q6P4F1 479 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 KCNT2Q6UVM3 1135 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 VSTM1Q6UX27 236 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZNF365Q70YC5 407 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 TADA2BQ86TJ2 420 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 SCN4BQ8IWT1 228 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 RHOT1Q8IXI2 618 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 C3orf20Q8ND61 904 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 TPCN2Q8NHX9 752 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 CCDC26Q8TAB7 109 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms