RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 TRIP13Q15645 432 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 C12orf56Q8IXR9 622 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 MOGAT1Q96PD6 335 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 ZNF317Q96PQ6 595 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 JPH2Q9BR39 696 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 PI4K2AQ9BTU6 479 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 DDX23Q9BUQ8 820 aaKnown RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 TRIM7Q9C029 511 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 RAVER2Q9HCJ3 691 aaKnown RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 PCSK1NQ9UHG2 260 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 ZNF536O15090 1300 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 FOXO6A8MYZ6 492 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 RASGRF2O14827 1237 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ACSL3O95573 720 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 CYP1A2P05177 515 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 VIMP08670 466 aaKnown RBP12.42□□□□□ -0.42
SYNE2-207ENST00000458046 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
SYNE2-207ENST00000458046 DRP2Q13474 957 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ALCAMQ13740 583 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 MUM1Q2TAK8 710 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 CLEC4DQ8WXI8 215 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ATG4AQ8WYN0 398 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 SHC3Q92529 594 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ART4Q93070 314 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 TAAR1Q96RJ0 339 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ACTR5Q9H9F9 607 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-207ENST00000458046 CNOT7Q9UIV1 285 aaKnown RBP12.42□□□□□ -0.42
SYNE2-207ENST00000458046 SLC4A7Q9Y6M7 1214 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ASTN2O75129 1339 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-207ENST00000458046 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-207ENST00000458046 C2orf81A6NN90 581 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 GGPS1O95749 300 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ICAM1P05362 532 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 RARGP13631 454 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 PDE6CP51160 858 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ADCY2Q08462 1091 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 AUHQ13825 339 aaKnown RBP12.42□□□□□ -0.42
SYNE2-207ENST00000458046 LRRC14Q15048 493 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 DAB2IPQ5VWQ8 1189 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 KRT39Q6A163 491 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 FAAH2Q6GMR7 532 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ARMC9Q7Z3E5 817 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 CCDC197Q8NCU1 140 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 CCT6BQ92526 530 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 NCAPGQ9BPX3 1015 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 ZNF341Q9BYN7 854 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 TAOK3Q9H2K8 898 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 TBX20Q9UMR3 447 aa12.42□□□□□ -0.42
SYNE2-207ENST00000458046 UTRNP46939 3433 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 PMM2O15305 246 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 AGTP01019 485 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 CDR2Q01850 454 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 CALCOCO2Q13137 446 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 GRM3Q14832 879 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 SWT1Q5T5J6 900 aaKnown RBP12.41□□□□□ -0.42
SYNE2-207ENST00000458046 SLC6A19Q695T7 634 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 FAM47EQ6ZV65 393 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 FAM122AQ96E09 287 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 IRAK4Q9NWZ3 460 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 RAB20Q9NX57 234 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 GPR52Q9Y2T5 361 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 DENND3A2RUS2 1198 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 CREB1P16220 341 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 NPTX2P47972 431 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 MRPS35P82673 323 aaKnown RBP12.41□□□□□ -0.42
SYNE2-207ENST00000458046 KRT17Q04695 432 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 CYP1B1Q16678 543 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 FUKQ8N0W3 1084 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 PWWP2AQ96N64 755 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 NT5C1BQ96P26 610 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 TSGA13Q96PP4 275 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
SYNE2-207ENST00000458046 CHST7Q9NS84 486 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 ASIC3Q9UHC3 531 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 ANAPC7Q9UJX3 599 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 UBIAD1Q9Y5Z9 338 aa12.41□□□□□ -0.42
SYNE2-207ENST00000458046 KLHL41O60662 606 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 MAPK4P31152 587 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 CHKAP35790 457 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 VPS41P49754 854 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 NCKAP1LP55160 1127 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 ZNF280AP59817 542 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-207ENST00000458046 ACAD10Q6JQN1 1059 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 SV2AQ7L0J3 742 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 EXOC3L1Q86VI1 746 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 TMEM161BQ8NDZ6 487 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 FBXL13Q8NEE6 735 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 SYTL5Q8TDW5 730 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-207ENST00000458046 CPA5Q8WXQ8 436 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 DDX1Q92499 740 aaKnown RBP12.4□□□□□ -0.42
SYNE2-207ENST00000458046 FAM118BQ9BPY3 351 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 CDC42EP4Q9H3Q1 356 aaKnown RBP12.4□□□□□ -0.42
SYNE2-207ENST00000458046 MLXIPLQ9NP71 852 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 USP20Q9Y2K6 914 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 PTCH2Q9Y6C5 1203 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms