RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TASP1Q9H6P5 420 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 MAGEF1Q9HAY2 307 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 TRPV5Q9NQA5 729 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 RXFP3Q9NSD7 469 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 HSPBP1Q9NZL4 362 aa16.91■□□□□ 0.3
CHCHD3-204ENST00000457942 EIF3DO15371 548 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 POLR2DO15514 142 aaKnown RBP16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 LRP3O75074 770 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 CLSTN1O94985 981 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 CHRNB1P11230 501 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 PDIA4P13667 645 aaKnown RBP16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 GPR15P49685 360 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 FCHO2Q0JRZ9 810 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 ARHGAP29Q52LW3 1261 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 INTS6LQ5JSJ4 861 aaKnown RBP16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 CBWD2Q8IUF1 395 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 NELFCDQ8IXH7 590 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 STKLD1Q8NE28 680 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 MSANTD3Q96H12 275 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 ZFYVE19Q96K21 471 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 MKNK1Q9BUB5 465 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 SMG9Q9H0W8 520 aaKnown RBP16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 SMOC1Q9H4F8 434 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 TMLHEQ9NVH6 421 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 INTS13Q9NVM9 706 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 BAHCC1Q9P281 2608 aa16.9■□□□□ 0.3
CHCHD3-204ENST00000457942 SPEGQ15772 3267 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 OBSL1O75147 1896 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 KIF26AQ9ULI4 1882 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 AXIN1O15169 862 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 PRAMEF12O95522 483 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 DLATP10515 647 aaKnown RBP16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 PCSK1P29120 753 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 AVPR1AP37288 418 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 LHX1P48742 406 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 PXNP49023 591 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 CYP2J2P51589 502 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 RPL10AP62906 217 aaKnown RBP16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 LRRC32Q14392 662 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 WDR44Q5JSH3 913 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 SDHAF4Q5VUM1 108 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 HS2ST1Q7LGA3 356 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 LONP2Q86WA8 852 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 SPATA2LQ8IUW3 424 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 TOP6BLQ8N6T0 577 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 RDH13Q8NBN7 331 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 BPIFB1Q8TDL5 484 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 HPDLQ96IR7 371 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 ACBD6Q9BR61 282 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 IER2Q9BTL4 223 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 BLZF1Q9H2G9 400 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 ARRDC1-AS1Q9H2J1 176 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 C8orf33Q9H7E9 229 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 IL21Q9HBE4 155 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 KIAA1586Q9HCI6 787 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 THG1LQ9NWX6 298 aaKnown RBP16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 GDAP2Q9NXN4 497 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 SIX4Q9UIU6 781 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 DENND4CQ5VZ89 1909 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 UBE4BO95155 1302 aa16.89■□□□□ 0.29
CHCHD3-204ENST00000457942 RALGAPA1Q6GYQ0 2036 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 K7ESF4 209 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 ARNTLO00327 626 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 CLIC2O15247 247 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 CSH1P0DML2 217 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 CSH2P0DML3 217 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 TNNI1P19237 187 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 CASP1P29466 404 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 PMLP29590 882 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 AFMP43652 599 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 COL9A2Q14055 689 aaPredicted RBP16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 SNRNP35Q16560 246 aaKnown RBP16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 DUOXA2Q1HG44 320 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 C1orf228Q6PIY5 440 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 TXNDC11Q6PKC3 985 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 UNC13DQ70J99 1090 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 OSTM1Q86WC4 334 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 WDR49Q8IV35 697 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 SCN4BQ8IWT1 228 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 CEP57L1Q8IYX8 460 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 MAB21L3Q8N8X9 362 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 C12orf50Q8NA57 414 aaPredicted RBP16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 TTC16Q8NEE8 873 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 OR5B17Q8NGF7 314 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 LEO1Q8WVC0 666 aaPredicted RBP16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 MRPS31Q92665 395 aaKnown RBP16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 C7orf25Q9BPX7 421 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 AGPAT3Q9NRZ7 376 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 OBP2AQ9NY56 170 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 ZMYM5Q9UJ78 669 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 GTF3C4Q9UKN8 822 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 CFAP45Q9UL16 551 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 PTPRJQ12913 1337 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 ZZEF1O43149 2961 aa16.88■□□□□ 0.29
CHCHD3-204ENST00000457942 SPECC1L-ADORA2AF8WAN1 911 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 CYP2F1P24903 491 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 NLRP12P59046 1061 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 PSMC1P62191 440 aaKnown RBP16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 PLCB2Q00722 1185 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms