RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SNCAIPQ9Y6H5 919 aa14.38□□□□□ -0.11
PTPRE-204ENST00000455661 PLSCR1O15162 318 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 TSHRP16473 764 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 DSG3P32926 999 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 QARSP47897 775 aaKnown RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 TFDP3Q5H9I0 405 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 FNBP1LQ5T0N5 605 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 FAM102BQ5T8I3 360 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ALYREFQ86V81 257 aaKnown RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 PHF13Q86YI8 300 aaPredicted RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 TRIM42Q8IWZ5 723 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ULK2Q8IYT8 1036 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 RBM15BQ8NDT2 890 aaKnown RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 CYTH2Q99418 400 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 THTPAQ9BU02 230 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 UBE2OQ9C0C9 1292 aaKnown RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ZWILCHQ9H900 591 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ARHGEF4Q9NR80 690 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ATXN10Q9UBB4 475 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 PPARGC1AQ9UBK2 798 aaKnown RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ZBTB21Q9ULJ3 1066 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 KLF11O14901 512 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ETV4P43268 484 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 NOMO3P69849 1222 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 C1QBPQ07021 282 aaKnown RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 PTK7Q13308 1070 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 BRDTQ58F21 947 aaPredicted RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 LRRC38Q5VT99 294 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 MAP4K3Q8IVH8 894 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ABRAQ8N0Z2 381 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 PDIK1LQ8N165 341 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 PANX3Q96QZ0 392 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 HAPLN3Q96S86 360 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 GPRC5CQ9NQ84 441 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 GINM1Q9NU53 330 aa14.37□□□□□ -0.11
PTPRE-204ENST00000455661 CCNL1Q9UK58 526 aaPredicted RBP14.37□□□□□ -0.11
PTPRE-204ENST00000455661 hCG_1818297A0A087WSY0 165 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 CAPN14A8MX76 684 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 OPHN1O60890 802 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 PIAS1O75925 651 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 PYGLP06737 847 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 YWHABP31946 246 aaKnown RBP14.36□□□□□ -0.11
PTPRE-204ENST00000455661 PTPN7P35236 360 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 CRKP46108 304 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 CACNB3P54284 484 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 CDC16Q13042 620 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 TBCCQ15814 346 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 BBS9Q3SYG4 887 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 TMCO4Q5TGY1 634 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 AMIGO3Q86WK7 504 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 MTBPQ96DY7 904 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 FBXL18Q96ME1 805 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 WWP1Q9H0M0 922 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 DDX56Q9NY93 547 aaKnown RBP14.36□□□□□ -0.11
PTPRE-204ENST00000455661 IVNS1ABPQ9Y6Y0 642 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 STRCQ7RTU9 1775 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 INHBAP08476 426 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 GNA15P30679 374 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 SLC18A2Q05940 514 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 KDSRQ06136 332 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 LSAMPQ13449 338 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 MAP7Q14244 749 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 QSER1Q2KHR3 1735 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 MSS51Q4VC12 460 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 ATG16L1Q676U5 607 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 AAGABQ6PD74 315 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 FAM43BQ6ZT52 329 aaPredicted RBP14.36□□□□□ -0.11
PTPRE-204ENST00000455661 ACAD11Q709F0 780 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 RASSF3Q86WH2 238 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 GPD1LQ8N335 351 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 CPT1BQ92523 772 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 SH2D3AQ9BRG2 576 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 PLA2G4CQ9UP65 541 aa14.36□□□□□ -0.11
PTPRE-204ENST00000455661 E7ESA3 106 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 G3V3G9 751 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 PYGBP11216 843 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 ENPEPQ07075 957 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 DMP1Q13316 513 aaPredicted RBP14.35□□□□□ -0.11
PTPRE-204ENST00000455661 MED21Q13503 144 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 NAT8LQ8N9F0 302 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 TMEM161BQ8NDZ6 487 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 RSAD2Q8WXG1 361 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 SERAC1Q96JX3 654 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 SLC7A8Q9UHI5 535 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 PCDHB4Q9Y5E5 795 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 COPEO14579 308 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 LYPLA2O95372 231 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 PENKP01210 267 aaPredicted RBP14.35□□□□□ -0.11
PTPRE-204ENST00000455661 GH2P01242 217 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 ATP5BP06576 529 aaKnown RBP14.35□□□□□ -0.11
PTPRE-204ENST00000455661 ZNF200P98182 395 aaPredicted RBP14.35□□□□□ -0.11
PTPRE-204ENST00000455661 GAD2Q05329 585 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 ASPHQ12797 758 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 HNRNPDQ14103 355 aaKnown RBP14.35□□□□□ -0.11
PTPRE-204ENST00000455661 ANKRD22Q5VYY1 191 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 ADGRG6Q86SQ4 1221 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 PRPF39Q86UA1 669 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms