RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SRFP11831 508 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GLULP15104 373 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GJA1P17302 382 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 MUTP22033 750 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GJB2P29033 226 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GMPRP36959 345 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 NBL1P41271 181 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 TNFSF9P41273 254 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 MATR3P43243 847 aaKnown RBP eCLIP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GUCY2FP51841 1108 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 YARSP54577 528 aaKnown RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 SLC12A3P55017 1021 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 ROR1Q01973 937 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 CREMQ03060 361 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GRIN1Q05586 938 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 ELAVL2Q12926 359 aaKnown RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 DMP1Q13316 513 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 ORC2Q13416 577 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 PCSK7Q16549 785 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 SLC5A9Q2M3M2 681 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 UVSSAQ2YD98 709 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 SLC10A6Q3KNW5 377 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 SLC44A4Q53GD3 710 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 XKR4Q5GH76 650 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 LIN9Q5TKA1 542 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 TXNDC11Q6PKC3 985 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 SLCO4C1Q6ZQN7 724 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GPR65Q8IYL9 337 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 ADSSL1Q8N142 457 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GOLGA6L1Q8N7Z2 621 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 SYT2Q8N9I0 419 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 KCNG4Q8TDN1 519 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 LRRC15Q8TF66 581 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 NKD2Q969F2 451 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 TCEAL4Q96EI5 215 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 TMX3Q96JJ7 454 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 MDFIQ99750 246 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 NTPCRQ9BSD7 190 aaKnown RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 CCDC94Q9BW85 323 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 MRPL4Q9BYD3 311 aaKnown RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 RHOBTB2Q9BYZ6 727 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 BHLHE41Q9C0J9 482 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 CYP4F11Q9HBI6 524 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 ARHGAP28Q9P2N2 729 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 ANKFY1Q9P2R3 1169 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 MTRRQ9UBK8 725 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GPN3Q9UHW5 284 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 GGT7Q9UJ14 662 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 STARD13Q9Y3M8 1113 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 TIMM13Q9Y5L4 95 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 R4GN57 208 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 USP34Q70CQ2 3546 aa5.12□□□□□ -1.59
GTF3C3-208ENST00000455546 ZFHX2Q9C0A1 2572 aaPredicted RBP5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 TICRRQ7Z2Z1 1910 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ADARB2-AS1A8MUL3 147 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 LACTBL1A8MY62 500 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 SHISA8B8ZZ34 492 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 H3BQV1 296 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 TMEM189-UBE2V1I3L0A0 370 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 PRRG1O14668 218 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 TRAPPC3O43617 180 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 TBC1D4O60343 1298 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 EIF5BO60841 1220 aaKnown RBP5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ABLIM3O94929 683 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 C1RP00736 705 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 HNRNPA1P09651 372 aaKnown RBP eCLIP5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 OR4Q2P0C623 313 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 PLA2G4BP0C869 781 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 CXCL8P10145 99 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 MCF2P10911 925 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 EPXP11678 715 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 PLS3P13797 630 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 PTPN2P17706 415 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 PROZP22891 400 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ELF1P32519 619 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 PRPHP41219 470 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 CCR2P41597 374 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 STARD6P59095 220 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ATP2C1P98194 919 aaPredicted RBP5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 SRSF11Q05519 484 aaKnown RBP5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ADCY1Q08828 1119 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 STRN3Q13033 797 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 CTXN3Q4LDR2 81 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 PABPC1LQ4VXU2 614 aaKnown RBP5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ARSHQ5FYA8 562 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ZBTB41Q5SVQ8 909 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 LARP1BQ659C4 914 aaKnown RBP5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 TANGO2Q6ICL3 276 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 MPZL3Q6UWV2 235 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ANKS3Q6ZW76 656 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 HS2ST1Q7LGA3 356 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 HAUS6Q7Z4H7 955 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 DCLK2Q8N568 766 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 GALNT6Q8NCL4 622 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 TMEM161BQ8NDZ6 487 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ZNF461Q8TAF7 563 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 SNX27Q96L92 541 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 DRC1Q96MC2 740 aa5.11□□□□□ -1.59
GTF3C3-208ENST00000455546 ZSWIM3Q96MP5 696 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms