RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 ECT2Q9H8V3 914 aa20.1■□□□□ 0.81
MSH6-206ENST00000455383 L1RE1Q9UN81 338 aa20.1■□□□□ 0.81
MSH6-206ENST00000455383 MAGED2Q9UNF1 606 aaPredicted RBP20.1■□□□□ 0.81
MSH6-206ENST00000455383 ATG2BQ96BY7 2078 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 ZNF638Q14966 1978 aaKnown RBP20.09■□□□□ 0.81
MSH6-206ENST00000455383 RPL10AP62906 217 aaKnown RBP20.09■□□□□ 0.81
MSH6-206ENST00000455383 USP4Q13107 963 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 DDR2Q16832 855 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 INTS6LQ5JSJ4 861 aaKnown RBP20.09■□□□□ 0.81
MSH6-206ENST00000455383 SFR1Q86XK3 245 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 CPA6Q8N4T0 437 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 C1orf127Q8N9H9 656 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 KRI1Q8N9T8 703 aaKnown RBP20.09■□□□□ 0.81
MSH6-206ENST00000455383 SPATA18Q8TC71 538 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 EXOC4Q96A65 974 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 DDX43Q9NXZ2 648 aaKnown RBP20.09■□□□□ 0.81
MSH6-206ENST00000455383 GCNT4Q9P109 453 aa20.09■□□□□ 0.81
MSH6-206ENST00000455383 CFAP47Q6ZTR5 3102 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 KCNK5O95279 499 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 APBB3O95704 486 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 TCF3P15923 654 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 KCNA4P22459 653 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 CYP2F1P24903 491 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 POLR2BP30876 1174 aaKnown RBP20.08■□□□□ 0.81
MSH6-206ENST00000455383 C8orf34Q49A92 452 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 CFAP221Q4G0U5 840 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 SCARA3Q6AZY7 606 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 BRSK2Q8IWQ3 736 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 TMEM86AQ8N2M4 240 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 LRRC52Q8N7C0 313 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 RPLP0P6Q8NHW5 317 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 CD101Q93033 1021 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 SLC22A12Q96S37 553 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 DUS2Q9NX74 493 aaKnown RBP20.08■□□□□ 0.81
MSH6-206ENST00000455383 GDAP2Q9NXN4 497 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 AGAP1Q9UPQ3 857 aa20.08■□□□□ 0.81
MSH6-206ENST00000455383 KIAA1549LQ6ZVL6 1849 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 GABRDO14764 452 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 RHOBTB1O94844 696 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 ITGB3P05106 788 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 USP17L7P0C7H9 530 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 KCNA1Q09470 495 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 DMC1Q14565 340 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 EML3Q32P44 896 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 OSTM1Q86WC4 334 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 ZSWIM2Q8NEG5 633 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 RASSF8Q8NHQ8 419 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 CYP2S1Q96SQ9 504 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 FAM213AQ9BRX8 229 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 SEL1LQ9UBV2 794 aa20.07■□□□□ 0.8
MSH6-206ENST00000455383 TRAV19A0A0A6YYK7 116 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 BCLAF3A2AJT9 711 aaKnown RBP20.06■□□□□ 0.8
MSH6-206ENST00000455383 DCLK1O15075 740 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 HUS1O60921 280 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 ACAT1P24752 427 aaKnown RBP20.06■□□□□ 0.8
MSH6-206ENST00000455383 TFAMQ00059 246 aaKnown RBP20.06■□□□□ 0.8
MSH6-206ENST00000455383 MYL7Q01449 175 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 SF3A1Q15459 793 aaKnown RBP20.06■□□□□ 0.8
MSH6-206ENST00000455383 ELF2Q15723 593 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 L1TD1Q5T7N2 865 aaKnown RBP20.06■□□□□ 0.8
MSH6-206ENST00000455383 RNF43Q68DV7 783 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 TCEAL6Q6IPX3 200 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 USP49Q70CQ1 688 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 TOP6BLQ8N6T0 577 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 ATP2A3Q93084 1043 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 TCEAL3Q969E4 200 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 ACDQ96AP0 544 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
MSH6-206ENST00000455383 GTF3C4Q9UKN8 822 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 WNT6Q9Y6F9 365 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 MYO16Q9Y6X6 1858 aa20.06■□□□□ 0.8
MSH6-206ENST00000455383 CD2BP2O95400 341 aaKnown RBP20.05■□□□□ 0.8
MSH6-206ENST00000455383 MAGEA11P43364 429 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 IFNAR2P48551 515 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 CCDC142Q17RM4 750 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 FAM171BQ6P995 826 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 DYMQ7RTS9 669 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 BRAPQ7Z569 592 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 CACTINQ8WUQ7 758 aaKnown RBP20.05■□□□□ 0.8
MSH6-206ENST00000455383 DNAJC19Q96DA6 116 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 EPSTI1Q96J88 318 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 ACCSQ96QU6 501 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 STK17AQ9UEE5 414 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 ITGA11Q9UKX5 1188 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 ARHGAP26Q9UNA1 814 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 EXOC7Q9UPT5 735 aa20.05■□□□□ 0.8
MSH6-206ENST00000455383 ANAPC1Q9H1A4 1944 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 CAVIN2O95810 425 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 LDHAP00338 332 aaKnown RBP20.04■□□□□ 0.8
MSH6-206ENST00000455383 CKMP06732 381 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 GAP43P17677 238 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 GARTP22102 1010 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 LHX1P48742 406 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 LARP1BQ659C4 914 aaKnown RBP20.04■□□□□ 0.8
MSH6-206ENST00000455383 LIMS2Q7Z4I7 341 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 RASSF3Q86WH2 238 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 ARL14EPQ8N8R7 260 aaPredicted RBP20.04■□□□□ 0.8
MSH6-206ENST00000455383 SH3RF2Q8TEC5 729 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 SAAL1Q96ER3 474 aa20.04■□□□□ 0.8
MSH6-206ENST00000455383 EDEM2Q9BV94 578 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms