RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 ZBTB8AQ96BR9 441 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 RTP3Q9BQQ7 232 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 TMX1Q9H3N1 280 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 DCTPP1Q9H773 170 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 NGRNQ9NPE2 291 aaKnown RBP4.24□□□□□ -1.73
RBM39-220ENST00000455343 GPRC5CQ9NQ84 441 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 MARCH2Q9P0N8 246 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 CDH22Q9UJ99 828 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 STRIP2Q9ULQ0 834 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 PADI3Q9ULW8 664 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 DDX19BQ9UMR2 479 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 CDY2AQ9Y6F7 541 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 MICAL3Q7RTP6 2002 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 CACNA1GO43497 2377 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 GPR179Q6PRD1 2367 aa4.24□□□□□ -1.73
RBM39-220ENST00000455343 TRIP12Q14669 1992 aaPredicted RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 ZMYM6O95789 1325 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 FRMPD4Q14CM0 1322 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 TTC41PQ6P2S7 1318 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 CCDC171Q6TFL3 1326 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 IGSF9BQ9UPX0 1349 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 KDM3AQ9Y4C1 1321 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 CEP250Q9BV73 2442 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 K7ESM1 405 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 NOP56O00567 594 aaKnown RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 ZBTB5O15062 677 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 FIBPO43427 364 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 MGEA5O60502 916 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 STAM2O75886 525 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 SRGAP2BP0DMP2 458 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 SP100P23497 879 aaPredicted RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 CCND2P30279 289 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 HOXA13P31271 388 aaPredicted RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 MTHFRP42898 656 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 FAM189BP81408 668 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 MRPS6P82932 125 aaKnown RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 CYP4F3Q08477 520 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 SLC35G1Q2M3R5 365 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 PAN2Q504Q3 1202 aaKnown RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 ASPRV1Q53RT3 343 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 RRP12Q5JTH9 1297 aaKnown RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 FAM102BQ5T8I3 360 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 GTF2IRD2BQ6EKJ0 949 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 CES5AQ6NT32 575 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 RSPH3Q86UC2 560 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 GTF2IRD2Q86UP8 949 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 MIB1Q86YT6 1006 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 DCLK2Q8N568 766 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 MRPL43Q8N983 215 aaKnown RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 SUMF1Q8NBK3 374 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 CYP2W1Q8TAV3 490 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 CASP10Q92851 521 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 MRRFQ96E11 262 aaKnown RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 MRGPRX3Q96LB0 322 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 GORASP1Q9BQQ3 440 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 APOL5Q9BWW9 433 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 AMNQ9BXJ7 453 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 MFSD1Q9H3U5 465 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 CWH43Q9H720 699 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 TYW1Q9NV66 732 aaKnown RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 TMEM260Q9NX78 707 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 DLGAP2Q9P1A6 1054 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 TUBE1Q9UJT0 475 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 ZNF215Q9UL58 517 aaPredicted RBP4.23□□□□□ -1.73
RBM39-220ENST00000455343 DUSP12Q9UNI6 340 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 OTOGLQ3ZCN5 2332 aa4.23□□□□□ -1.73
RBM39-220ENST00000455343 SALL3Q9BXA9 1300 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 GSTTP1A0A1W2PQM5 241 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 CCER2I3L3R5 266 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 SGSM2O43147 1006 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 ATP9AO75110 1047 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 INSRRP14616 1297 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 LAG3P18627 525 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 TGM1P22735 817 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 THBS2P35442 1172 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 TCF7P36402 384 aaPredicted RBP4.22□□□□□ -1.73
RBM39-220ENST00000455343 ATXN1P54253 815 aaKnown RBP4.22□□□□□ -1.73
RBM39-220ENST00000455343 PPFIA1Q13136 1202 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 TDGQ13569 410 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 NCAPHQ15003 741 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 INF2Q27J81 1249 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 CCDC178Q5BJE1 867 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 ATAT1Q5SQI0 421 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 UTP14CQ5TAP6 766 aaKnown RBP4.22□□□□□ -1.73
RBM39-220ENST00000455343 PLPP4Q5VZY2 271 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 KIAA1841Q6NSI8 718 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 KCNT2Q6UVM3 1135 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 ETV3LQ6ZN32 361 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 LRRC55Q6ZSA7 311 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 MFSD6Q6ZSS7 791 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 SLC24A5Q71RS6 500 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 TICAM2Q86XR7 235 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 TBC1D10CQ8IV04 446 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 TEX2Q8IWB9 1127 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 THNSL1Q8IYQ7 743 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 NME8Q8N427 588 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 COLGALT1Q8NBJ5 622 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 ADAMTS17Q8TE56 1095 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 FRS2Q8WU20 508 aa4.22□□□□□ -1.73
RBM39-220ENST00000455343 SEPT1Q8WYJ6 367 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms