RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TTC13Q8NBP0 860 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 SLC35F5Q8WV83 523 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 TEKT4Q8WW24 435 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 TSC1Q92574 1164 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 ZNF668Q96K58 619 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 CNPY3Q9BT09 278 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 CRISPLD2Q9H0B8 497 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 LRRC19Q9H756 370 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 GDF3Q9NR23 364 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 FAM114A2Q9NRY5 505 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 TMEM161AQ9NX61 479 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 STK39Q9UEW8 545 aa7.22□□□□□ -1.25
ECHDC1-210ENST00000454859 PATJQ8NI35 1801 aa7.21□□□□□ -1.25
ECHDC1-210ENST00000454859 PCNTO95613 3336 aa7.21□□□□□ -1.25
ECHDC1-210ENST00000454859 ARL5CA6NH57 179 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 C9IYK1 514 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 XPO1O14980 1071 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 RRP9O43818 475 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 SRGAP2O75044 1071 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 EFCAB14O75071 495 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 PHF2O75151 1096 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 RNF8O76064 485 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 ZRANB2O95218 330 aaKnown RBP eCLIP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 FGFR4P22455 802 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 PTPN9P43378 593 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 EPHB4P54760 987 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 AIF1P55008 147 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 UPP1Q16831 310 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 EFHC1Q5JVL4 640 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 FBXO38Q6PIJ6 1188 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 TRAF7Q6Q0C0 670 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 CCNI2Q6ZMN8 369 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 XYLT1Q86Y38 959 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC13A5Q86YT5 568 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 ADGRF2Q8IZF7 708 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 BBOF1Q8ND07 529 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 SEPT8Q92599 483 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 CAVIN3Q969G5 261 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 CAPZA3Q96KX2 299 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 PPP1R16BQ96T49 567 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 ACBD6Q9BR61 282 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 C11orf70Q9BRQ4 267 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 MRPL9Q9BYD2 267 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 FOXP3Q9BZS1 431 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 SYNCQ9H7C4 482 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 TUBGCP4Q9UGJ1 667 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 A8MXQ7 604 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 M0QYV0 167 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 ZNF185O15231 689 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 NCK2O43639 380 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 TJP3O95049 919 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 ZNF143P52747 638 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 PSMC1P62191 440 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 CAV1Q03135 178 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 ELAVL2Q12926 359 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 NFX1Q12986 1120 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 MTA1Q13330 715 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 TAZQ16635 292 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 LONRF2Q1L5Z9 754 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 BOLA3Q53S33 107 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 PLEKHG4Q58EX7 1191 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 ZNF618Q5T7W0 954 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 CC2D1AQ6P1N0 951 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 DENND1BQ6P3S1 775 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 AGMOQ6ZNB7 445 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 LRRC8DQ7L1W4 858 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC26A9Q7LBE3 791 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 THEM5Q8N1Q8 247 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 MREGQ8N565 214 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 NOA1Q8NC60 698 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 GSTCDQ8NEC7 633 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 KBTBD7Q8WVZ9 684 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 IRGQQ8WZA9 623 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 ADAM2Q99965 735 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 TMEM175Q9BSA9 504 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 DUSP16Q9BY84 665 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 COMMD8Q9NX08 183 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 TSPAN16Q9UKR8 245 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 TRIM17Q9Y577 477 aa7.21□□□□□ -1.26
ECHDC1-210ENST00000454859 PTPRDP23468 1912 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 COL4A4P53420 1690 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 SMAPO00193 183 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 CYB561D2O14569 222 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 SYN3O14994 580 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 FGGP02679 453 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 CXCL10P02778 98 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 AKAP5P24588 427 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 CD52P31358 61 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 RDXP35241 583 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 CLCN6P51797 869 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 CDH8P55286 799 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC6A3Q01959 620 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 PDK2Q15119 407 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 CCNG2Q16589 344 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 PTPN20Q4JDL3 420 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 ACBD5Q5T8D3 534 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 SCARA5Q6ZMJ2 495 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 CROCCP2Q86T23 111 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 MAP7D3Q8IWC1 876 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms