RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ANKRD52Q8NB46 1076 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 ZNF461Q8TAF7 563 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 SPPL2BQ8TCT7 592 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 STK32AQ8WU08 396 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 SLC20A1Q8WUM9 679 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 MYLPFQ96A32 169 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 CEP295NLQ96MC4 621 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 TMEM209Q96SK2 561 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 CHP1Q99653 195 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 TCF25Q9BQ70 676 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 B3GNT5Q9BYG0 378 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 UBXN6Q9BZV1 441 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 NHEJ1Q9H9Q4 299 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-206ENST00000454852 CSNK1G1Q9HCP0 422 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 GTF3C4Q9UKN8 822 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 TSPAN16Q9UKR8 245 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 CDY1Q9Y6F8 540 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 WDR27A2RRH5 827 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 C2orf71A6NGG8 1288 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 DDX3XO00571 662 aaKnown RBP eCLIP11.93□□□□□ -0.52e-10■□□□□ 10.6
TRAF4-206ENST00000454852 TEX28O15482 410 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 ARHGAP6O43182 974 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 LPXNO60711 386 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 PLEKP08567 350 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-206ENST00000454852 UNGP13051 313 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-206ENST00000454852 EIF4A3P38919 411 aaKnown RBP11.93□□□□□ -0.5
TRAF4-206ENST00000454852 GPD2P43304 727 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 BCAT1P54687 386 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 CENPCQ03188 943 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 ORC1Q13415 861 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 SLC18A3Q16572 532 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 HS1BP3Q53T59 392 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 TDRD12Q587J7 1177 aaKnown RBP11.93□□□□□ -0.5
TRAF4-206ENST00000454852 MDH1BQ5I0G3 518 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 VSTM1Q6UX27 236 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 RTL10Q7L3V2 364 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 TMC7Q7Z402 723 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 TTC30AQ86WT1 665 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 SLC2A14Q8TDB8 520 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 KLHL5Q96PQ7 755 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 PCDHB18PQ96TA0 734 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 DUSP16Q9BY84 665 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 PNPLA8Q9NP80 782 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 CYLDQ9NQC7 956 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 TMLHEQ9NVH6 421 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 AFF4Q9UHB7 1163 aaKnown RBP11.93□□□□□ -0.5
TRAF4-206ENST00000454852 CHD9Q3L8U1 2897 aa11.93□□□□□ -0.5
TRAF4-206ENST00000454852 COL4A4P53420 1690 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-206ENST00000454852 MTMR11A4FU01 709 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 EIF3CLB5ME19 914 aaKnown RBP11.92□□□□□ -0.5
TRAF4-206ENST00000454852 ADAM12O43184 909 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 NRDCO43847 1150 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 MICAL2O94851 1124 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 VNN2O95498 520 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 CXCL14O95715 111 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 ADH1AP07327 375 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 MMEP08473 750 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 CNPP09543 421 aaKnown RBP11.92□□□□□ -0.5
TRAF4-206ENST00000454852 CCDC130P13994 396 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 ATF2P15336 505 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 OR1D2P34982 312 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 KIF11P52732 1056 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 NOMO3P69849 1222 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 BST2Q10589 180 aaKnown RBP11.92□□□□□ -0.5
TRAF4-206ENST00000454852 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 SLC39A12Q504Y0 691 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 C10orf76Q5T2E6 689 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 LILRA6Q6PI73 481 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 CLEC20AQ6ZU45 233 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 FAM35AQ86V20 835 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 WDTC1Q8N5D0 677 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 SLC35F5Q8WV83 523 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 SMARCD1Q96GM5 515 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 CCDC42Q96M95 316 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 EIF3CQ99613 913 aaKnown RBP11.92□□□□□ -0.5
TRAF4-206ENST00000454852 LPIN3Q9BQK8 851 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 EMILIN2Q9BXX0 1053 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 ISCUQ9H1K1 167 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 KCNF1Q9H3M0 494 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 ZNF576Q9H609 170 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 ENTPD7Q9NQZ7 604 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 FAM49BQ9NUQ9 324 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 LMCD1Q9NZU5 365 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 HESX1Q9UBX0 185 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 ADAMTS1Q9UHI8 967 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 NAGPAQ9UK23 515 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 MTUS1Q9ULD2 1270 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 PCDHB5Q9Y5E4 795 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 EPN1Q9Y6I3 576 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-206ENST00000454852 ATG2AQ2TAZ0 1938 aa11.92□□□□□ -0.5
TRAF4-206ENST00000454852 PATJQ8NI35 1801 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 LAMA3Q16787 3333 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 A0A087X0T9 212 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-206ENST00000454852 EPOPA6NHQ4 379 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 C2CD2LO14523 706 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 XPO1O14980 1071 aaKnown RBP11.91□□□□□ -0.5
TRAF4-206ENST00000454852 NDUFA10O95299 355 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms