RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 NAT8LQ8N9F0 302 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 SLC4A11Q8NBS3 891 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 USP6NLQ92738 828 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 SMARCAD1Q9H4L7 1026 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 ASB7Q9H672 318 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 DNAJC17Q9NVM6 304 aaKnown RBP13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 PSMC3IPQ9P2W1 217 aaPredicted RBP13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 RALGAPA2Q2PPJ7 1873 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 APOC4-APOC2K7ER74 178 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 TYROBPO43914 113 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 CILPO75339 1184 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 UBOX5O94941 541 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 GH1P01241 217 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 APOC2P02655 101 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 HMGCRP04035 888 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 CCNB1P14635 433 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 PSMA2P25787 234 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 FOXN2P32314 431 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 SSTR3P32745 418 aaPredicted RBP13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 PHBP35232 272 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 RFC1P35251 1148 aaPredicted RBP13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 ARL4CP56559 192 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 PPARDQ03181 441 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 PDK4Q16654 411 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 ZNF484Q5JVG2 852 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 KAZNQ674X7 775 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 ASRGL1Q7L266 308 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 NT5DC4Q86YG4 428 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 ANKRD42Q8N9B4 389 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 ZNF398Q8TD17 642 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 FAM118BQ9BPY3 351 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 MIS12Q9H081 205 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 TRABDQ9H4I3 376 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 ACSS3Q9H6R3 686 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 RPF1Q9H9Y2 349 aaKnown RBP13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 CYTH4Q9UIA0 394 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 FZD1Q9UP38 647 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 KCNH4Q9UQ05 1017 aa13.15□□□□□ -0.3
ECHDC1-209ENST00000454591 CLUHO75153 1309 aa13.15□□□□□ -0.31
ECHDC1-209ENST00000454591 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 CAPN15O75808 1086 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 ZWINTO95229 277 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 ZSCAN5DPP0CG00 497 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 VDRP11473 427 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 NQO1P15559 274 aaKnown RBP13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 YARSP54577 528 aaKnown RBP13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 GEMIN4P57678 1058 aaKnown RBP13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 GPX6P59796 221 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 TFAMQ00059 246 aaKnown RBP13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 OTUD4Q01804 1114 aaKnown RBP13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 PTPN11Q06124 597 aaPredicted RBP13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 MYO1EQ12965 1108 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 TMED2Q15363 201 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 HIF1AQ16665 826 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 KLHL38Q2WGJ6 581 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 EEF1DP3Q658K8 133 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 CYP4F22Q6NT55 531 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 C1orf127Q8N9H9 656 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 ATP11CQ8NB49 1132 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 JOSD2Q8TAC2 188 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 ACTL9Q8TC94 416 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 CPT1BQ92523 772 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 ALKBH8Q96BT7 664 aaKnown RBP13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 FRMD8Q9BZ67 464 aaPredicted RBP13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 ARHGEF3Q9NR81 526 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 KLHL11Q9NVR0 708 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 KLHL14Q9P2G3 628 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 RABGEF1Q9UJ41 708 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 AGAP1Q9UPQ3 857 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 COL1A2P08123 1366 aa13.14□□□□□ -0.31
ECHDC1-209ENST00000454591 ATP5HO75947 161 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 C22orf31O95567 290 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ATP6V1G2O95670 118 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 TRUB2O95900 331 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 P4HA1P13674 534 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ETS1P14921 441 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 IL1R2P27930 398 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 STIP1P31948 543 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 RPL22P35268 128 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 PSMC1P62191 440 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 MOGSQ13724 837 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 STILQ15468 1287 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 AMHR2Q16671 573 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 HSDL1Q3SXM5 330 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 CYP4A22Q5TCH4 519 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 CCDC91Q7Z6B0 441 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 PRUNE1Q86TP1 453 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms