RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 LMBRD2Q68DH5 695 aaPredicted RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 CPNE8Q86YQ8 564 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 NLRP7Q8WX94 980 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 RABGGTAQ92696 567 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 SPATA17Q96L03 361 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 ACAP3Q96P50 834 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 PRMT1Q99873 361 aaKnown RBP5.3□□□□□ -1.56
RIF1-207ENST00000454583 NIF3L1Q9GZT8 377 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 RAB6CQ9H0N0 254 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 IL21Q9HBE4 155 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 CISHQ9NSE2 258 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 DNAJC12Q9UKB3 198 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 AKT3Q9Y243 479 aa5.3□□□□□ -1.56
RIF1-207ENST00000454583 ADAM12O43184 909 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 RPS6KA5O75582 802 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 ITGB3P05106 788 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 SERPING1P05155 500 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 MMEP08473 750 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 WEE2P0C1S8 567 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 EPB41P11171 864 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 LIG4P49917 911 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 GAB4Q2WGN9 574 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 HSP90AA4PQ58FG1 418 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 CC2D1AQ6P1N0 951 aaPredicted RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 CLEC20AQ6ZU45 233 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 BADQ92934 168 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 HAUS4Q9H6D7 363 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 RSAD1Q9HA92 442 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 SUGCTQ9HAC7 445 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 GDF3Q9NR23 364 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 ASNSD1Q9NWL6 643 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 UBQLN1Q9UMX0 589 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.29□□□□□ -1.56
RIF1-207ENST00000454583 GRID2IPA4D2P6 1211 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 LINC01553A4QN01 128 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 CCDC169A6NNP5 214 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 NRP1O14786 923 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 ZSCAN12O43309 604 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 ERBB2P04626 1255 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 CCDC175P0C221 793 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 SKIP12755 728 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 MAGEA11P43364 429 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 UBXN1Q04323 297 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 BFSP2Q13515 415 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 BMS1Q14692 1282 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 TMEM132DQ14C87 1099 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 EXOC3L4Q17RC7 722 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 DCLRE1AQ6PJP8 1040 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 GBP6Q6ZN66 633 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 NECAB2Q7Z6G3 386 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 TMCO2Q7Z6W1 182 aaPredicted RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 SLC35F6Q8N357 371 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 RNF10Q8N5U6 811 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 EIF1ADQ8N9N8 165 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 VTI1AQ96AJ9 217 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 VCPIP1Q96JH7 1222 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 ACBD6Q9BR61 282 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 LSM14BQ9BX40 385 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 S1PR5Q9H228 398 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 EPB41L4BQ9H329 900 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 BARX2Q9UMQ3 279 aaPredicted RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 ZNF487B1APH4 448 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 PODXLO00592 558 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 SYN3O14994 580 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 GPR37O15354 613 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 LSM8O95777 96 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 MAN1A1P33908 653 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 RAP1GAPP47736 663 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 MXI1P50539 228 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 SCNN1GP51170 649 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 CLCN4P51793 760 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 CNGA2Q16280 664 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 DUOXA2Q1HG44 320 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 PTPN20Q4JDL3 420 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 STXBP4Q6ZWJ1 553 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 ZBTB33Q86T24 672 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 VSIG1Q86XK7 387 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 PLPP6Q8IY26 295 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 NOA1Q8NC60 698 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 TADA1Q96BN2 335 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 TRMT2BQ96GJ1 504 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 ZNF419Q96HQ0 510 aaPredicted RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 IGSF21Q96ID5 467 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 EPAS1Q99814 870 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 WDR6Q9NNW5 1121 aaKnown RBP5.29□□□□□ -1.56
RIF1-207ENST00000454583 SNX12Q9UMY4 172 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 PCDHA13Q9Y5I0 950 aa5.29□□□□□ -1.56
RIF1-207ENST00000454583 A0A1W2PPC1 479 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 KPNA7A9QM74 516 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 H0YGN5 161 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 ARNTLO00327 626 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 GLP2RO95838 553 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 MYBL2P10244 700 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 CTNNA2P26232 953 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 POLR2BP30876 1174 aaKnown RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 KRT9P35527 623 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 KIF11P52732 1056 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 KLHL10Q6JEL2 608 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 DENND1BQ6P3S1 775 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms