RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 CTSHP09668 335 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 RARBP10826 455 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 GAD2Q05329 585 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
SMPD4-213ENST00000454468 HIF1AQ16665 826 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 TTC16Q8NEE8 873 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 EXD1Q8NHP7 514 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 CD101Q93033 1021 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 PITPNM3Q9BZ71 974 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.58□□□□□ -0.42e-6■□□□□ 11
SMPD4-213ENST00000454468 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-213ENST00000454468 PDHXO00330 501 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 PSTPIP1O43586 416 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 MYL3P08590 195 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 CYP2B6P20813 491 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 MAP2K2P36507 400 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 RTP1P59025 263 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 MYO1EQ12965 1108 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 SNAPC2Q13487 334 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 PIGHQ14442 188 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-213ENST00000454468 CCNG2Q16589 344 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 CYP4X1Q8N118 509 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 C1orf127Q8N9H9 656 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 BBOF1Q8ND07 529 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 B3GNT5Q9BYG0 378 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 CEP41Q9BYV8 373 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 PDLIM7Q9NR12 457 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 DPP3Q9NY33 737 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
SMPD4-213ENST00000454468 TPX2Q9ULW0 747 aaKnown RBP12.58□□□□□ -0.4
SMPD4-213ENST00000454468 E2F8A0AVK6 867 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 E5RJQ4 531 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 KCNN4O15554 427 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 HCRTO43612 131 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 CYP1A1P04798 512 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-213ENST00000454468 APRTP07741 180 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 ARF4P18085 180 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-213ENST00000454468 GOLGA7BQ2TAP0 167 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 PDIK1LQ8N165 341 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 RXFP2Q8WXD0 754 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 SLITRK1Q96PX8 696 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 RAB6BQ9NRW1 208 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 KLHL14Q9P2G3 628 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 STRIP2Q9ULQ0 834 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 NR2E3Q9Y5X4 410 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 CNTNAP2Q9UHC6 1331 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 ASB14A6NK59 587 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 MICAL2O94851 1124 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 MIPP30301 263 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 NIFKQ9BYG3 293 aaKnown RBP12.57□□□□□ -0.4
SMPD4-213ENST00000454468 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 PRMT7Q9NVM4 692 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-213ENST00000454468 WHRNQ9P202 907 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 TSPAN16Q9UKR8 245 aa12.57□□□□□ -0.4
SMPD4-213ENST00000454468 COL2A1P02458 1487 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-213ENST00000454468 TMEM191CA6NGB0 347 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 ZBED1O96006 694 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 KRT7P08729 469 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 MSH2P43246 934 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
SMPD4-213ENST00000454468 CROCCP2Q86T23 111 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 PPM1NQ8N819 430 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 PPP1R14CQ8TAE6 165 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 TTC17Q96AE7 1141 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 TMEM176AQ96HP8 235 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 FAM129AQ9BZQ8 928 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 TRABDQ9H4I3 376 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 TMEM134Q9H6X4 195 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 SLC12A6Q9UHW9 1150 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 XPO7Q9UIA9 1087 aaKnown RBP12.56□□□□□ -0.4
SMPD4-213ENST00000454468 MYH9P35579 1960 aaKnown RBP12.56□□□□□ -0.4
SMPD4-213ENST00000454468 CCDC78A2IDD5 438 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 IQCF3P0C7M6 154 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 ATP2A2P16615 1042 aaKnown RBP12.56□□□□□ -0.4
SMPD4-213ENST00000454468 SDC4P31431 198 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 RABGGTBP53611 331 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 BCAR1P56945 870 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 NME3Q13232 169 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 PKN2Q16513 984 aaKnown RBP12.56□□□□□ -0.4
SMPD4-213ENST00000454468 PAN2Q504Q3 1202 aaKnown RBP12.56□□□□□ -0.4
SMPD4-213ENST00000454468 ARHGEF18Q6ZSZ5 1173 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 GOLGA2P5Q9HBQ8 144 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 CACNG4Q9UBN1 327 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 A6NJR5 290 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 CREB3O43889 395 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 CDH16O75309 829 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 SUN1O94901 812 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 ERBB2P04626 1255 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 ACAT1P24752 427 aaKnown RBP12.56□□□□□ -0.4
SMPD4-213ENST00000454468 YY1P25490 414 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 IL9RQ01113 521 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 OVGP1Q12889 678 aa12.56□□□□□ -0.4
SMPD4-213ENST00000454468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms