RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 SULT1E1P49888 294 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 NUDT2P50583 147 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 RBBP7Q16576 425 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 TTC33Q6PID6 262 aaPredicted RBP12.53□□□□□ -0.4
SEC16A-207ENST00000453963 FBXO36Q8NEA4 188 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 CALML6Q8TD86 181 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 NAALADL1Q9UQQ1 740 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 NRXN1Q9ULB1 1477 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 CDC42EP1Q00587 391 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 MYBPC2Q14324 1141 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 RASA2Q15283 850 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 DDHD1Q8NEL9 900 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 OR6J1Q8NGC5 347 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 EXD1Q8NHP7 514 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 APBB2Q92870 758 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 MAML3Q96JK9 1138 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 SMARCAD1Q9H4L7 1026 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 PCDHGB4Q9UN71 923 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 SATB2Q9UPW6 733 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 MTSS1O43312 755 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 PDE5AO76074 875 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 ITGA4P13612 1032 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 CYP11B1P15538 503 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 NUP107P57740 925 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 VEPH1Q14D04 833 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 PKN1Q16512 942 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 IFNEQ86WN2 208 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 TMEM143Q96AN5 459 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 PAFAH2Q99487 392 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 DCDC2Q9UHG0 476 aa12.52□□□□□ -0.4
SEC16A-207ENST00000453963 MAFGO15525 162 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 ATP9AO75110 1047 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 CASP4P49662 377 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 RGS7P49802 495 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 MTM1Q13496 603 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 GIT2Q14161 759 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
SEC16A-207ENST00000453963 CENPTQ96BT3 561 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 RUSC1Q9BVN2 902 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 EFCAB1Q9HAE3 211 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 DYNC1LI2O43237 492 aaPredicted RBP12.52□□□□□ -0.41
SEC16A-207ENST00000453963 MED24O75448 989 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 CACNA2D1P54289 1103 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 DEFA1P59665 94 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 DEFA3P59666 94 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 CUL2Q13617 745 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 LAMB3Q13751 1172 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 TFDP3Q5H9I0 405 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 IZUMO2Q6UXV1 221 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 RMDN1Q96DB5 314 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 CNDP1Q96KN2 507 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 CNBD2Q96M20 576 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 PI4K2AQ9BTU6 479 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 TMEM120AQ9BXJ8 343 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 KLHL4Q9C0H6 718 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.52□□□□□ -0.41
SEC16A-207ENST00000453963 KIAA1210Q9ULL0 1709 aa12.52□□□□□ -0.41
SEC16A-207ENST00000453963 MSH4O15457 936 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 H2AFYO75367 372 aaKnown RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 PROSCO94903 275 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 CLPTM1O96005 669 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 PYGLP06737 847 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 PSMC3P17980 439 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 FDFT1P37268 417 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 RFC5P40937 340 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 ATXN3P54252 364 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SLC34A1Q06495 639 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 EMC2Q15006 297 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 C6orf10Q5SRN2 563 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 TMPRSS6Q8IU80 811 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 ELMO2Q96JJ3 720 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 NAT9Q9BTE0 207 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 PIK3C2BO00750 1634 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 DFFAO00273 331 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 AKAP3O75969 853 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 IL18RAPO95256 599 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 GYS1P13807 737 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 CPB1P15086 417 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 PLOD1Q02809 727 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 EFHC1Q5JVL4 640 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 TAS2R42Q7RTR8 314 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 EFL1Q7Z2Z2 1120 aaKnown RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 GPR141Q7Z602 305 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SLC26A11Q86WA9 606 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 RDM1Q8NG50 284 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SCFD2Q8WU76 684 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 PARK7Q99497 189 aaKnown RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 NT5C1AQ9BXI3 368 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 NDFIP2Q9NV92 336 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SLC25A27O95847 323 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 HMOX2P30519 316 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SNX30Q5VWJ9 437 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 KIAA0895Q8NCT3 520 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms