RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 TMEM9BQ9NQ34 198 aa15.38■□□□□ 0.05
LYSMD3-202ENST00000453259 DUS2Q9NX74 493 aaKnown RBP15.38■□□□□ 0.05
LYSMD3-202ENST00000453259 AGO2Q9UKV8 859 aaKnown RBP15.38■□□□□ 0.05
LYSMD3-202ENST00000453259 OBSL1O75147 1896 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 NPHP3-ACAD11A0A0J9YXS1 232 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 PRPF40AO75400 957 aaKnown RBP15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 NFATC1O95644 943 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 KRT18P05783 430 aaKnown RBP15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 CKMP06732 381 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 HOXC13P31276 330 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 ACOT2P49753 483 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 MYL7Q01449 175 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 ZNF252P-AS1Q0IIN9 211 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 HSF5Q4G112 596 aaPredicted RBP15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 SPDYCQ5MJ68 293 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 LMBRD2Q68DH5 695 aaPredicted RBP15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 FIZ1Q96SL8 496 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 FBRSL1Q9HCM7 1045 aaKnown RBP15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 EHD2Q9NZN4 543 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 EVLQ9UI08 416 aaPredicted RBP15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 WASF3Q9UPY6 502 aa15.37■□□□□ 0.05
LYSMD3-202ENST00000453259 SCN1AP35498 2009 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 ANK1P16157 1881 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 C4orf47A7E2U8 309 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 HUS1O60921 280 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 PCSK1P29120 753 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 GBP1P32455 592 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 DGKEP52429 567 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 LMAN2Q12907 356 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 EML3Q32P44 896 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 INTS6LQ5JSJ4 861 aaKnown RBP15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 TCEAL6Q6IPX3 200 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 CACTINQ8WUQ7 758 aaKnown RBP15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 TCEAL3Q969E4 200 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 PLIN2Q99541 437 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 GDAP2Q9NXN4 497 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 SEL1LQ9UBV2 794 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 ARHGAP26Q9UNA1 814 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 MAGED2Q9UNF1 606 aaPredicted RBP15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 SDK1Q7Z5N4 2213 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 KIAA1549LQ6ZVL6 1849 aa15.36■□□□□ 0.05
LYSMD3-202ENST00000453259 LAMA1P25391 3075 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 TCHHQ07283 1943 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 ZNF638Q14966 1978 aaKnown RBP15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 TADA3O75528 432 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 ALDH1A2O94788 518 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 HOXD12P35452 270 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 LONP1P36776 959 aaKnown RBP15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 MAGEA11P43364 429 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 LHX1P48742 406 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 MRPS21P82921 87 aaKnown RBP15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 KCNB1Q14721 858 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 SH3PXD2AQ5TCZ1 1133 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 MCTP1Q6DN14 999 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 CYP2U1Q7Z449 544 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 PDCL2Q8N4E4 241 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 KRI1Q8N9T8 703 aaKnown RBP15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 RIN3Q8TB24 985 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 USP33Q8TEY7 942 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 RAD54LQ92698 747 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 PI4K2AQ9BTU6 479 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 ADAM33Q9BZ11 813 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 SMOC1Q9H4F8 434 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 ITGA11Q9UKX5 1188 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 ZMIZ1Q9ULJ6 1067 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 MMP17Q9ULZ9 603 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 EXOC7Q9UPT5 735 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 FRYQ5TBA9 3013 aa15.35■□□□□ 0.05
LYSMD3-202ENST00000453259 LDHAP00338 332 aaKnown RBP15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 EIF2DP41214 584 aaKnown RBP15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 PPP3CCP48454 512 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 BYSLQ13895 437 aaKnown RBP15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 MAPRE1Q15691 268 aaKnown RBP15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 VSTM1Q6UX27 236 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 C4orf50Q6ZRC1 276 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 DPH6Q7L8W6 267 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 EFCAB13Q8IY85 973 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 TOP6BLQ8N6T0 577 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 POMGNT1Q8WZA1 660 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 LARP4BQ92615 738 aaKnown RBP15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 EZH1Q92800 747 aaPredicted RBP15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 SPACA7Q96KW9 195 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 PKMYT1Q99640 499 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 BLOC1S4Q9NUP1 217 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 TMLHEQ9NVH6 421 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 DDX43Q9NXZ2 648 aaKnown RBP15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 GCNT4Q9P109 453 aa15.34■□□□□ 0.05
LYSMD3-202ENST00000453259 UPK3BL1B0FP48 263 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 C1QTNF9BB2RNN3 333 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 ANKRD63C9JTQ0 380 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 UPK3BL2E5RIL1 263 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 SLC9A3R1O14745 358 aaPredicted RBP15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 TNFRSF10BO14763 440 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 C1QTNF9P0C862 333 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 PSMD2Q13200 908 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 CRY1Q16526 586 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 CRELD2Q6UXH1 353 aaPredicted RBP15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 ZNF720Q7Z2F6 126 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 SPATA2LQ8IUW3 424 aaPredicted RBP15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 BRSK2Q8IWQ3 736 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms