RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 FREM2Q5SZK8 3169 aa11.62□□□□□ -0.55
RPE-214ENST00000452025 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 ANTXRLA6NF34 631 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 H0YCG3 227 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 PRPF40AO75400 957 aaKnown RBP11.61□□□□□ -0.55
RPE-214ENST00000452025 CSH1P0DML2 217 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 CSH2P0DML3 217 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 TRAPPC10P48553 1259 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 TAF6P49848 677 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 SIM1P81133 766 aaPredicted RBP11.61□□□□□ -0.55
RPE-214ENST00000452025 FAM160A1Q05DH4 1040 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 PDIA5Q14554 519 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 KYAT1Q16773 422 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 EML3Q32P44 896 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 C2orf27AQ580R0 203 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 MON1AQ86VX9 555 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 RASSF3Q86WH2 238 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 CCDC83Q8IWF9 413 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 THEM5Q8N1Q8 247 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 CCDC33Q8N5R6 958 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 USP33Q8TEY7 942 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 SPACA7Q96KW9 195 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 CNOT6LQ96LI5 555 aaKnown RBP11.61□□□□□ -0.55
RPE-214ENST00000452025 SLC22A12Q96S37 553 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 NTPCRQ9BSD7 190 aaKnown RBP11.61□□□□□ -0.55
RPE-214ENST00000452025 NUSAP1Q9BXS6 441 aaKnown RBP11.61□□□□□ -0.55
RPE-214ENST00000452025 SLC32A1Q9H598 525 aa11.61□□□□□ -0.55
RPE-214ENST00000452025 EVLQ9UI08 416 aaPredicted RBP11.61□□□□□ -0.55
RPE-214ENST00000452025 MYO18AQ92614 2054 aaKnown RBP11.61□□□□□ -0.55
RPE-214ENST00000452025 TRAV19A0A0A6YYK7 116 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 PIRO00625 290 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 ENGP17813 658 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 SLC12A3P55017 1021 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 TSPY1Q01534 308 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 SMARCB1Q12824 385 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 LMAN2Q12907 356 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 KCNB1Q14721 858 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 IL17AQ16552 155 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 SLC39A4Q6P5W5 647 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 EFCAB13Q8IY85 973 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 DCP1BQ8IZD4 617 aaKnown RBP11.6□□□□□ -0.55
RPE-214ENST00000452025 SH3RF2Q8TEC5 729 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 RLN3Q8WXF3 142 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 TMEM206Q9H813 350 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 FSCN3Q9NQT6 498 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 LARSQ9P2J5 1176 aaKnown RBP11.6□□□□□ -0.55
RPE-214ENST00000452025 UXTQ9UBK9 157 aaPredicted RBP11.6□□□□□ -0.55
RPE-214ENST00000452025 CPSF3Q9UKF6 684 aaKnown RBP11.6□□□□□ -0.55
RPE-214ENST00000452025 MMP17Q9ULZ9 603 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 LOC400499M0QZD8 3231 aa11.6□□□□□ -0.55
RPE-214ENST00000452025 GCN1Q92616 2671 aaKnown RBP11.59□□□□□ -0.55
RPE-214ENST00000452025 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 A0A0B4J269 797 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 TISP43B9A030 160 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 NFATC1O95644 943 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 PIGRP01833 764 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 CFIP05156 583 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 ADRB2P07550 413 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 USP17L7P0C7H9 530 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 PLA2G4BP0C869 781 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 HNRNPLP14866 589 aaKnown RBP eCLIP11.59□□□□□ -0.55
RPE-214ENST00000452025 PAX3P23760 479 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 OPRD1P41143 372 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 PTGER3P43115 390 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 ACOT2P49753 483 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 TOB1P50616 345 aaPredicted RBP11.59□□□□□ -0.55
RPE-214ENST00000452025 NEK4P51957 841 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 DDR2Q16832 855 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 SV2CQ496J9 727 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 ZC2HC1CQ53FD0 456 aaPredicted RBP11.59□□□□□ -0.55
RPE-214ENST00000452025 LPCAT2Q7L5N7 544 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 SFTPA1Q8IWL2 248 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 CD302Q8IX05 232 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 TMEFF1Q8IYR6 380 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 ARL14EPQ8N8R7 260 aaPredicted RBP11.59□□□□□ -0.55
RPE-214ENST00000452025 SYT2Q8N9I0 419 aaPredicted RBP11.59□□□□□ -0.55
RPE-214ENST00000452025 FBXO18Q8NFZ0 1043 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 CDK5RAP3Q96JB5 506 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 ZNF560Q96MR9 790 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 PNMA5Q96PV4 448 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 TSPAN18Q96SJ8 248 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 CYP2S1Q96SQ9 504 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 GTPBP2Q9BX10 602 aaKnown RBP11.59□□□□□ -0.55
RPE-214ENST00000452025 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
RPE-214ENST00000452025 DERAQ9Y315 318 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 MSRB2Q9Y3D2 182 aa11.59□□□□□ -0.55
RPE-214ENST00000452025 C2orf78A6NCI8 922 aa11.58□□□□□ -0.56
RPE-214ENST00000452025 K7EQS6 105 aa11.58□□□□□ -0.56
RPE-214ENST00000452025 TAF4O00268 1085 aa11.58□□□□□ -0.56
RPE-214ENST00000452025 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
RPE-214ENST00000452025 SCAMP3O14828 347 aaKnown RBP11.58□□□□□ -0.56
RPE-214ENST00000452025 MAP3K13O43283 966 aa11.58□□□□□ -0.56
RPE-214ENST00000452025 ALDH1A2O94788 518 aa11.58□□□□□ -0.56
RPE-214ENST00000452025 NOL4O94818 638 aa11.58□□□□□ -0.56
RPE-214ENST00000452025 FAM13AO94988 1023 aa11.58□□□□□ -0.56
RPE-214ENST00000452025 SEC24BO95487 1268 aa11.58□□□□□ -0.56
RPE-214ENST00000452025 ACAT1P24752 427 aaKnown RBP11.58□□□□□ -0.56
RPE-214ENST00000452025 CYP2F1P24903 491 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms