RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 SLC16A3O15427 465 aaKnown RBP18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 DLATP10515 647 aaKnown RBP18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 ATF6P18850 670 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 CDK11BP21127 795 aaKnown RBP18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 CD72P21854 359 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 TUFMP49411 452 aaKnown RBP18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 MLF2Q15773 248 aaPredicted RBP18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 CCDC40Q4G0X9 1142 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 PHLDB3Q6NSJ2 640 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 LUZP1Q86V48 1076 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 DHX40Q8IX18 779 aaKnown RBP18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 ZC3H3Q8IXZ2 948 aaKnown RBP18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 CCDC105Q8IYK2 499 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 SMARCD2Q92925 531 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 PI4K2AQ9BTU6 479 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 METTL14Q9HCE5 456 aaKnown RBP18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 SIT1Q9Y3P8 196 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 ASB3Q9Y575 518 aa18.24■□□□□ 0.51
PRPF40A-204ENST00000450303 CST3P01034 146 aaPredicted RBP18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 HAPLN1P10915 354 aaPredicted RBP18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 KRT13P13646 458 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 TNNI1P19237 187 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 GABRR2P28476 465 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 GPR15P49685 360 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 STARD6P59095 220 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 TSPY1Q01534 308 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 PFKPQ01813 784 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 CYP24A1Q07973 514 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 CCDC142Q17RM4 750 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 SOWAHAQ2M3V2 549 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 VITQ6UXI7 678 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 GAREM2Q75VX8 874 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 ITIH5Q86UX2 942 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 CREBRFQ8IUR6 639 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 WDR49Q8IV35 697 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 RNF214Q8ND24 703 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 STKLD1Q8NE28 680 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 SPPL2BQ8TCT7 592 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 HPDLQ96IR7 371 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 SHDQ96IW2 340 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 MED15Q96RN5 788 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 ATXN3LQ9H3M9 355 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 FANCLQ9NW38 375 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 GDAP2Q9NXN4 497 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 HSFX1Q9UBD0 423 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 GTF3C4Q9UKN8 822 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 MTF2Q9Y483 593 aaPredicted RBP18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 PCDHB5Q9Y5E4 795 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 MIA3Q5JRA6 1907 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 NCANO14594 1321 aa18.23■□□□□ 0.51
PRPF40A-204ENST00000450303 CACNA1HO95180 2353 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 TPM2P07951 284 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 CYP4F8P98187 520 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 MYL7Q01449 175 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 MYO1EQ12965 1108 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 VEPH1Q14D04 833 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 NCAPHQ15003 741 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 PSMD6Q15008 389 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 TAF12Q16514 161 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 SDHAF4Q5VUM1 108 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 TRAPPC11Q7Z392 1133 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 FAM186BQ8IYM0 893 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 ADGRF2Q8IZF7 708 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 TMEM86AQ8N2M4 240 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 C2orf15Q8WU43 125 aaKnown RBP18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 FNBP1Q96RU3 617 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 ACBD6Q9BR61 282 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 TRMT61BQ9BVS5 477 aaKnown RBP18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 IRF2BPLQ9H1B7 796 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 BRD9Q9H8M2 597 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 HEBP1Q9NRV9 189 aa18.22■□□□□ 0.51
PRPF40A-204ENST00000450303 KANSL1LA0AUZ9 987 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 HEPACAM2A8MVW5 462 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 EEF1GP26641 437 aaKnown RBP18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 GDI1P31150 447 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 CASP4P49662 377 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 PRKCQQ04759 706 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 SMARCB1Q12824 385 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 UBXN2BQ14CS0 331 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 ANGPT1Q15389 498 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 HS1BP3Q53T59 392 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 INTS6LQ5JSJ4 861 aaKnown RBP18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 GPR158Q5T848 1215 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 TPRG1Q6ZUI0 275 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 INTS8Q75QN2 995 aaKnown RBP18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 FRMD5Q7Z6J6 570 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 TOP6BLQ8N6T0 577 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 PJA1Q8NG27 643 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 ZNF516Q92618 1163 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 RSPRY1Q96DX4 576 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 CGRRF1Q99675 332 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 GPR88Q9GZN0 384 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 SAMSN1Q9NSI8 373 aaKnown RBP18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 ARMCX3Q9UH62 379 aaPredicted RBP18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 TICRRQ7Z2Z1 1910 aa18.21■□□□□ 0.51
PRPF40A-204ENST00000450303 FAM170BA6NMN3 283 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 ATP2C2O75185 946 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 PDGFRBP09619 1106 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 GLULP15104 373 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 PSMC3P17980 439 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms