RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 LHX1P48742 406 aa15.05■□□□□ 0
USP39-207ENST00000450066 DSTYKQ6XUX3 929 aa15.05■□□□□ 0
USP39-207ENST00000450066 ANKRD52Q8NB46 1076 aa15.05■□□□□ 0
USP39-207ENST00000450066 B3GALNT2Q8NCR0 500 aa15.05■□□□□ 0
USP39-207ENST00000450066 SLC35F5Q8WV83 523 aa15.05■□□□□ 0
USP39-207ENST00000450066 ZNF333Q96JL9 665 aa15.05■□□□□ 0
USP39-207ENST00000450066 TOX2Q96NM4 488 aa15.05■□□□□ 0
USP39-207ENST00000450066 ST7Q9NRC1 585 aa15.05■□□□□ 0
USP39-207ENST00000450066 ARGLU1Q9NWB6 273 aaPredicted RBP15.05■□□□□ 0
USP39-207ENST00000450066 RAB21Q9UL25 225 aa15.05■□□□□ 0
USP39-207ENST00000450066 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.05■□□□□ 0
USP39-207ENST00000450066 GOLGA8SH3BPF8 625 aa15.05■□□□□ -0
USP39-207ENST00000450066 B3GAT3O94766 335 aa15.05■□□□□ -0
USP39-207ENST00000450066 SNX16P57768 344 aa15.05■□□□□ -0
USP39-207ENST00000450066 PIGHQ14442 188 aaPredicted RBP15.05■□□□□ -0
USP39-207ENST00000450066 GLE1Q53GS7 698 aaKnown RBP15.05■□□□□ -0
USP39-207ENST00000450066 CTU1Q7Z7A3 348 aaKnown RBP15.05■□□□□ -0
USP39-207ENST00000450066 NIPA2Q8N8Q9 360 aa15.05■□□□□ -0
USP39-207ENST00000450066 DBF4BQ8NFT6 615 aa15.05■□□□□ -0
USP39-207ENST00000450066 FNIP1Q8TF40 1166 aa15.05■□□□□ -0
USP39-207ENST00000450066 SEPT8Q92599 483 aa15.05■□□□□ -0
USP39-207ENST00000450066 APBB2Q92870 758 aa15.05■□□□□ -0
USP39-207ENST00000450066 PNKPQ96T60 521 aa15.05■□□□□ -0
USP39-207ENST00000450066 LPIN3Q9BQK8 851 aa15.05■□□□□ -0
USP39-207ENST00000450066 SLC4A5Q9BY07 1137 aa15.05■□□□□ -0
USP39-207ENST00000450066 ELAC1Q9H777 363 aaKnown RBP15.05■□□□□ -0
USP39-207ENST00000450066 TMEM161AQ9NX61 479 aa15.05■□□□□ -0
USP39-207ENST00000450066 DCDC2CA8MYV0 355 aa15.04■□□□□ -0
USP39-207ENST00000450066 TDRD15B5MCY1 1934 aaKnown RBP15.04■□□□□ -0
USP39-207ENST00000450066 CCDC188H7C350 402 aa15.04■□□□□ -0
USP39-207ENST00000450066 KRIT1O00522 736 aa15.04■□□□□ -0
USP39-207ENST00000450066 PSTPIP1O43586 416 aa15.04■□□□□ -0
USP39-207ENST00000450066 CCDC130P13994 396 aa15.04■□□□□ -0
USP39-207ENST00000450066 RFC1P35251 1148 aaPredicted RBP15.04■□□□□ -0
USP39-207ENST00000450066 ATN1P54259 1190 aaPredicted RBP15.04■□□□□ -0
USP39-207ENST00000450066 BCAT1P54687 386 aa15.04■□□□□ -0
USP39-207ENST00000450066 ZNF252P-AS1Q0IIN9 211 aa15.04■□□□□ -0
USP39-207ENST00000450066 BST2Q10589 180 aaKnown RBP15.04■□□□□ -0
USP39-207ENST00000450066 ZNF211Q13398 564 aaPredicted RBP15.04■□□□□ -0
USP39-207ENST00000450066 TIGD5Q53EQ6 642 aa15.04■□□□□ -0
USP39-207ENST00000450066 CLLU1OSQ5K130 101 aa15.04■□□□□ -0
USP39-207ENST00000450066 C1orf53Q5VUE5 145 aa15.04■□□□□ -0
USP39-207ENST00000450066 PMF1Q6P1K2 205 aa15.04■□□□□ -0
USP39-207ENST00000450066 WDR93Q6P2C0 686 aa15.04■□□□□ -0
USP39-207ENST00000450066 FBXO46Q6PJ61 603 aaPredicted RBP15.04■□□□□ -0
USP39-207ENST00000450066 DCLRE1AQ6PJP8 1040 aa15.04■□□□□ -0
USP39-207ENST00000450066 TMEM110Q86TL2 294 aa15.04■□□□□ -0
USP39-207ENST00000450066 RHOT1Q8IXI2 618 aa15.04■□□□□ -0
USP39-207ENST00000450066 DNAJC5GQ8N7S2 189 aa15.04■□□□□ -0
USP39-207ENST00000450066 SPATA18Q8TC71 538 aa15.04■□□□□ -0
USP39-207ENST00000450066 PLVAPQ9BX97 442 aa15.04■□□□□ -0
USP39-207ENST00000450066 KANSL3Q9P2N6 904 aa15.04■□□□□ -0
USP39-207ENST00000450066 E5RJQ4 531 aa15.04■□□□□ -0
USP39-207ENST00000450066 ENPP3O14638 875 aa15.04■□□□□ -0
USP39-207ENST00000450066 PARNO95453 639 aaKnown RBP15.04■□□□□ -0
USP39-207ENST00000450066 PYGMP11217 842 aa15.04■□□□□ -0
USP39-207ENST00000450066 PTPN1P18031 435 aaKnown RBP15.04■□□□□ -0
USP39-207ENST00000450066 RBM10P98175 930 aaKnown RBP15.04■□□□□ -0
USP39-207ENST00000450066 OGDHQ02218 1023 aa15.04■□□□□ -0
USP39-207ENST00000450066 PDE4CQ08493 712 aa15.04■□□□□ -0
USP39-207ENST00000450066 LONRF2Q1L5Z9 754 aa15.04■□□□□ -0
USP39-207ENST00000450066 NOMO2Q5JPE7 1267 aa15.04■□□□□ -0
USP39-207ENST00000450066 SEL1L2Q5TEA6 688 aa15.04■□□□□ -0
USP39-207ENST00000450066 CD300LGQ6UXG3 332 aa15.04■□□□□ -0
USP39-207ENST00000450066 URGCPQ8TCY9 931 aa15.04■□□□□ -0
USP39-207ENST00000450066 SLC2A14Q8TDB8 520 aa15.04■□□□□ -0
USP39-207ENST00000450066 HNRNPABQ99729 332 aaKnown RBP15.04■□□□□ -0
USP39-207ENST00000450066 LRRC1Q9BTT6 524 aa15.04■□□□□ -0
USP39-207ENST00000450066 HIPK3Q9H422 1215 aa15.04■□□□□ -0
USP39-207ENST00000450066 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
USP39-207ENST00000450066 DDX43Q9NXZ2 648 aaKnown RBP15.04■□□□□ -0
USP39-207ENST00000450066 M0QZQ0 153 aa15.03■□□□□ -0
USP39-207ENST00000450066 ODC1P11926 461 aa15.03■□□□□ -0
USP39-207ENST00000450066 ADORA2BP29275 332 aa15.03■□□□□ -0
USP39-207ENST00000450066 C1QTNF8P60827 252 aa15.03■□□□□ -0
USP39-207ENST00000450066 DSC1Q08554 894 aa15.03■□□□□ -0
USP39-207ENST00000450066 FAAP100Q0VG06 881 aa15.03■□□□□ -0
USP39-207ENST00000450066 BRD3Q15059 726 aa15.03■□□□□ -0
USP39-207ENST00000450066 AP1M1Q9BXS5 423 aa15.03■□□□□ -0
USP39-207ENST00000450066 CYLDQ9NQC7 956 aa15.03■□□□□ -0
USP39-207ENST00000450066 METTL5Q9NRN9 209 aaKnown RBP15.03■□□□□ -0
USP39-207ENST00000450066 CCDC151A5D8V7 595 aa15.02■□□□□ -0
USP39-207ENST00000450066 F8VP50 259 aa15.02■□□□□ -0
USP39-207ENST00000450066 TULP2O00295 520 aa15.02■□□□□ -0
USP39-207ENST00000450066 ATP2C2O75185 946 aa15.02■□□□□ -0
USP39-207ENST00000450066 CYP11A1P05108 521 aa15.02■□□□□ -0
USP39-207ENST00000450066 ACAT1P24752 427 aaKnown RBP15.02■□□□□ -0
USP39-207ENST00000450066 MCM3P25205 808 aa15.02■□□□□ -0
USP39-207ENST00000450066 RPL34P49207 117 aaKnown RBP15.02■□□□□ -0
USP39-207ENST00000450066 RGS7P49802 495 aa15.02■□□□□ -0
USP39-207ENST00000450066 FAM102AQ5T9C2 384 aaPredicted RBP15.02■□□□□ -0
USP39-207ENST00000450066 LRRC38Q5VT99 294 aa15.02■□□□□ -0
USP39-207ENST00000450066 C8orf74Q6P047 294 aa15.02■□□□□ -0
USP39-207ENST00000450066 ZDHHC17Q8IUH5 632 aa15.02■□□□□ -0
USP39-207ENST00000450066 JOSD2Q8TAC2 188 aa15.02■□□□□ -0
USP39-207ENST00000450066 RUBCNQ92622 972 aa15.02■□□□□ -0
USP39-207ENST00000450066 ARMC5Q96C12 935 aa15.02■□□□□ -0
USP39-207ENST00000450066 KRT12Q99456 494 aa15.02■□□□□ -0
USP39-207ENST00000450066 DSEQ9UL01 958 aa15.02■□□□□ -0
USP39-207ENST00000450066 USTQ9Y2C2 406 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms