RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 AP3M2P53677 418 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 NLRP12P59046 1061 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 PSMC1P62191 440 aaKnown RBP16.34■□□□□ 0.21
CHD3-205ENST00000449744 FCHO2Q0JRZ9 810 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 ARHGAP29Q52LW3 1261 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 FAM171BQ6P995 826 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 LIMS2Q7Z4I7 341 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 CELF5Q8N6W0 485 aaKnown RBP16.34■□□□□ 0.21
CHD3-205ENST00000449744 STKLD1Q8NE28 680 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 OR6B3Q8NGW1 331 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 BPIFB1Q8TDL5 484 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
CHD3-205ENST00000449744 MSANTD3Q96H12 275 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 SLC46A2Q9BY10 475 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 THG1LQ9NWX6 298 aaKnown RBP16.34■□□□□ 0.21
CHD3-205ENST00000449744 ATP2C2O75185 946 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 TACC1O75410 805 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 NOL4O94818 638 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 PRAMEF12O95522 483 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 F11P03951 625 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 FAM163BP0C2L3 166 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 SP9P0CG40 484 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 ATICP31939 592 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 GNL1P36915 607 aaPredicted RBP16.33■□□□□ 0.2
CHD3-205ENST00000449744 CASP4P49662 377 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 MYL6P60660 151 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 CYP27A1Q02318 531 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 CCDC142Q17RM4 750 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 ZC3H14Q6PJT7 736 aaKnown RBP16.33■□□□□ 0.2
CHD3-205ENST00000449744 KRBA2Q6ZNG9 492 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 ASCL5Q7RTU5 278 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 SLC9A9Q8IVB4 645 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 CMTM8Q8IZV2 173 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 MAB21L3Q8N8X9 362 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 ZNF516Q92618 1163 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 MYLPFQ96A32 169 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 CLDN23Q96B33 292 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 MRPL45Q9BRJ2 306 aaKnown RBP16.33■□□□□ 0.2
CHD3-205ENST00000449744 SMG9Q9H0W8 520 aaKnown RBP16.33■□□□□ 0.2
CHD3-205ENST00000449744 KCTD10Q9H3F6 313 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 C8orf33Q9H7E9 229 aaPredicted RBP16.33■□□□□ 0.2
CHD3-205ENST00000449744 GDPD2Q9HCC8 539 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 NXF1Q9UBU9 619 aaKnown RBP16.33■□□□□ 0.2
CHD3-205ENST00000449744 FRMD4BQ9Y2L6 1034 aa16.33■□□□□ 0.2
CHD3-205ENST00000449744 PRR23AA6NEV1 266 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 SOBPA7XYQ1 873 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 ARNTLO00327 626 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 STAU1O95793 577 aaKnown RBP16.32■□□□□ 0.2
CHD3-205ENST00000449744 NR3C1P04150 777 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 CCNE1P24864 410 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 ANXA13P27216 316 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 GRIK1P39086 918 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 MAGEA11P43364 429 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 RPS9P46781 194 aaKnown RBP16.32■□□□□ 0.2
CHD3-205ENST00000449744 MLLT6P55198 1093 aaPredicted RBP16.32■□□□□ 0.2
CHD3-205ENST00000449744 PLCB2Q00722 1185 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 CEP135Q66GS9 1140 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 C1orf228Q6PIY5 440 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 VSTM1Q6UX27 236 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 TICRRQ7Z2Z1 1910 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 TMEM150AQ86TG1 271 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 NUP210Q8TEM1 1887 aaPredicted RBP16.32■□□□□ 0.2
CHD3-205ENST00000449744 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 TRMT2BQ96GJ1 504 aaKnown RBP16.32■□□□□ 0.2
CHD3-205ENST00000449744 ZFYVE19Q96K21 471 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 GZF1Q9H116 711 aaPredicted RBP16.32■□□□□ 0.2
CHD3-205ENST00000449744 SEMA4AQ9H3S1 761 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 CRTAC1Q9NQ79 661 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 DMAC2Q9NW81 257 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 R4GN57 208 aa16.32■□□□□ 0.2
CHD3-205ENST00000449744 GOLGA6L4A6NEF3 574 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 SHISA7A6NL88 538 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 LRRIQ3A6PVS8 624 aaPredicted RBP16.31■□□□□ 0.2
CHD3-205ENST00000449744 A8MXQ7 604 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 RHOBTB3O94955 611 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 ZNF202O95125 648 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 BDNFP23560 247 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
CHD3-205ENST00000449744 DPYDQ12882 1025 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 ZNF699Q32M78 642 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 MDH1BQ5I0G3 518 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 TDRD10Q5VZ19 366 aaKnown RBP16.31■□□□□ 0.2
CHD3-205ENST00000449744 TXNDC8Q6A555 127 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 MON1AQ86VX9 555 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 TTC8Q8TAM2 541 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 MYCBPAPQ8TBZ2 947 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 PLEKHO2Q8TD55 490 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 TMEM174Q8WUU8 243 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 PCED1BQ96HM7 432 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 MYRFLQ96LU7 910 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 LRRC3BQ96PB8 259 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 GOLPH3LQ9H4A5 285 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 KIF9Q9HAQ2 790 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 LMAN1LQ9HAT1 526 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 TRPC7Q9HCX4 862 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 FBXO4Q9UKT5 387 aa16.31■□□□□ 0.2
CHD3-205ENST00000449744 TRIM66O15016 1216 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 PTPN1P18031 435 aaKnown RBP16.3■□□□□ 0.2
CHD3-205ENST00000449744 NUCB2P80303 420 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms