RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 DDR1Q08345 913 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 FUT2Q10981 343 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 LRRC36Q1X8D7 754 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 RNF219Q5W0B1 726 aaPredicted RBP10.85□□□□□ -0.67
CTC1-202ENST00000449476 CYB5D1Q6P9G0 228 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 ZNF606Q8WXB4 792 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 ASIC4Q96FT7 647 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 FRMD8P1Q9BZ68 369 aaPredicted RBP10.85□□□□□ -0.67
CTC1-202ENST00000449476 ARHGEF38Q9NXL2 777 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTC1-202ENST00000449476 CCL15-CCL14A0A0B4J2E2 113 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 LOC100653049A0A140TA62 436 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 KRT34O76011 436 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 KLHL2O95198 593 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 FAM200BP0CF97 657 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 CPA2P48052 419 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 KCNMA1Q12791 1236 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 CCL15Q16663 113 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 ANO4Q32M45 955 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 LRRC8EQ6NSJ5 796 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 TMC3Q7Z5M5 1100 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 WDR49Q8IV35 697 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 EML4Q9HC35 981 aaKnown RBP10.85□□□□□ -0.67
CTC1-202ENST00000449476 SLC24A3Q9HC58 644 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 KCNMB3Q9NPA1 279 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 KLK14Q9P0G3 267 aa10.85□□□□□ -0.67
CTC1-202ENST00000449476 MAP2K7O14733 419 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 DNAJC8O75937 253 aaPredicted RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 LSM8O95777 96 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 EPHB2P29323 1055 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 PNPLA4P41247 253 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 GCNT1Q02742 428 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 SPATA20Q8TB22 786 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 GTF3C2Q8WUA4 911 aaPredicted RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 TFB1MQ8WVM0 346 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 SPIRE2Q8WWL2 714 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 NSL1Q96IY1 281 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 PARK7Q99497 189 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 VPS33BQ9H267 617 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 MTSS1O43312 755 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 ANP32DO95626 131 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 CYP3A4P08684 503 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 STAG3L1P0CL83 205 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 MYL2P10916 166 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 PCSK7Q16549 785 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 C1orf186Q6ZWK4 172 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 LRP10Q7Z4F1 713 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 IPMKQ8NFU5 416 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 MKL1Q969V6 931 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 KCNK16Q96T55 309 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 NDFIP2Q9NV92 336 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 USP20Q9Y2K6 914 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 M0QYT0 321 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 HMBSP08397 361 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 RARAP10276 462 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 TARSP26639 723 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 PRKCIP41743 596 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 AARSP49588 968 aaKnown RBP eCLIP10.84□□□□□ -0.67
CTC1-202ENST00000449476 PTPN11Q06124 597 aaPredicted RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 FOXD4Q12950 439 aaPredicted RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 ZNF484Q5JVG2 852 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 NIPA1Q7RTP0 329 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 TSEN2Q8NCE0 465 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 CNPY3Q9BT09 278 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 NOD2Q9HC29 1040 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 SPON1Q9HCB6 807 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 GPATCH2LQ9NWQ4 482 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 PPME1Q9Y570 386 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 MCF2P10911 925 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 KCNA2P16389 499 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 HADHAP40939 763 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 RPL21P46778 160 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 ITIH4Q14624 930 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 C15orf52Q6ZUT6 534 aaKnown RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 NLRP9Q7RTR0 991 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 ABTB1Q969K4 478 aaPredicted RBP10.84□□□□□ -0.67
CTC1-202ENST00000449476 CMTM5Q96DZ9 223 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 ELMO2Q96JJ3 720 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 MAGEB18Q96M61 343 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 DDIT4Q9NX09 232 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 RPS6KL1Q9Y6S9 549 aa10.84□□□□□ -0.67
CTC1-202ENST00000449476 RASSF10A6NK89 507 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 ZBBXA8MT70 800 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 TISP43B9A030 160 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 MEIS2O14770 477 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 AIM2O14862 343 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 SCTRP47872 440 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 ARHGDIAP52565 204 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 KLC1Q07866 573 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 ZNF844Q08AG5 666 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 CAPRIN1Q14444 709 aaKnown RBP10.83□□□□□ -0.68
CTC1-202ENST00000449476 DCAF4L1Q3SXM0 396 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 FBXO16Q8IX29 292 aaPredicted RBP10.83□□□□□ -0.68
CTC1-202ENST00000449476 CEP70Q8NHQ1 597 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 FAM172AQ8WUF8 416 aa10.83□□□□□ -0.68
CTC1-202ENST00000449476 TMA16Q96EY4 203 aaKnown RBP10.83□□□□□ -0.68
CTC1-202ENST00000449476 GDF3Q9NR23 364 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms