RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 CPXM1Q96SM3 734 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 MPHOSPH6Q99547 160 aaKnown RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 INO80BQ9C086 356 aaPredicted RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 SDCBP2Q9H190 292 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 ZWILCHQ9H900 591 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 SENP1Q9P0U3 644 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 WDR35Q9P2L0 1181 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 AGTPBP1Q9UPW5 1226 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 ZSWIM8A7E2V4 1837 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 IRF6O14896 467 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 IFNB1P01574 187 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 CXCL8P10145 99 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 KDELR1P24390 212 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 NCALDP61601 193 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 BNIP1Q12981 228 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 PDIA2Q13087 525 aaKnown RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 HADHQ16836 314 aaKnown RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 ZNF667Q5HYK9 610 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 HP1BP3Q5SSJ5 553 aaPredicted RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 CDR2LQ86X02 465 aaPredicted RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 TMEM192Q8IY95 271 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 GPC2Q8N158 579 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 MINDY3Q9H8M7 445 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 VPS37BQ9H9H4 285 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 SAE1Q9UBE0 346 aaPredicted RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 SLC24A2Q9UI40 661 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 MCM3APO60318 1980 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 A0A0G2JLL6 359 aaPredicted RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 POC1B-GALNT4F8VUJ3 575 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 MAGEB2O15479 319 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 CST8O60676 142 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 PGK2P07205 417 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 SLC26A2P50443 739 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 IRX3P78415 501 aaPredicted RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 ZNF268Q14587 947 aaPredicted RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 PKN2Q16513 984 aaKnown RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 SMTNL2Q2TAL5 461 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 CCDC62Q6P9F0 684 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 DLK2Q6UY11 383 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 PRRT2Q7Z6L0 340 aaPredicted RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 C1orf127Q8N9H9 656 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 ZNF668Q96K58 619 aaPredicted RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 TRABDQ9H4I3 376 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 RPF1Q9H9Y2 349 aaKnown RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 GGT7Q9UJ14 662 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 CSADQ9Y600 493 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 EVPLQ92817 2033 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 SLC25A27O95847 323 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 ERBB2P04626 1255 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 PSMC4P43686 418 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 GDF10P55107 478 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 CDH8P55286 799 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 GPX6P59796 221 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 HIF1AQ16665 826 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 EFHC2Q5JST6 749 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 KCNT1Q5JUK3 1230 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 RNF43Q68DV7 783 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 RGS9BPQ6ZS82 235 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 PPIL6Q8IXY8 311 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 SLC4A11Q8NBS3 891 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 CXorf38Q8TB03 319 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 SPATA33Q96N06 139 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 ASCC2Q9H1I8 757 aaPredicted RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 RXFP1Q9HBX9 757 aa17.79■□□□□ 0.44
TOM1-210ENST00000449058 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
TOM1-210ENST00000449058 CLUHO75153 1309 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 DNAJC25-GNG10A0A024R161 153 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 SPAG7O75391 227 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 NFICP08651 508 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 KRT19P08727 400 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 CTCFP49711 727 aaPredicted RBP17.78■□□□□ 0.44
TOM1-210ENST00000449058 DYNLT1P63172 113 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 MYO1EQ12965 1108 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 EFCAB12Q6NXP0 572 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 DHX37Q8IY37 1157 aaKnown RBP17.78■□□□□ 0.44
TOM1-210ENST00000449058 FITM2Q8N6M3 262 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 NAT8LQ8N9F0 302 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 CPT1BQ92523 772 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 TWNKQ96RR1 684 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 NFKBIZQ9BYH8 718 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 SMARCAD1Q9H4L7 1026 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 METTL5Q9NRN9 209 aaKnown RBP17.78■□□□□ 0.44
TOM1-210ENST00000449058 FETUBQ9UGM5 382 aa17.78■□□□□ 0.44
TOM1-210ENST00000449058 GPR25O00155 361 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 HBP1O60381 514 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 GABRB2P47870 512 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 CLCN3P51790 818 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 MGAT5Q09328 741 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 ANKRD22Q5VYY1 191 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 EMC1Q8N766 993 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 CMASQ8NFW8 434 aaPredicted RBP17.77■□□□□ 0.44
TOM1-210ENST00000449058 MCRS1Q96EZ8 462 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 RMDN2Q96LZ7 410 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 ELOVL4Q9GZR5 314 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 ECT2Q9H8V3 914 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 KIF9Q9HAQ2 790 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 ZMYND8Q9ULU4 1186 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms