RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TMEM130Q8N3G9 435 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 FAM71DQ8N9W8 422 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 MICAL1Q8TDZ2 1067 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PRPF31Q8WWY3 499 aaKnown RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 ACAD9Q9H845 621 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 ZFP69BQ9UJL9 534 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 CHMP2BQ9UQN3 213 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 DRG1Q9Y295 367 aaKnown RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 STYXL1Q9Y6J8 313 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 TCRBV7S3A2A0A539 114 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 SPATA31C2B4DYI2 1134 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PIK3R2O00459 728 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PRPF4O43172 522 aaKnown RBP eCLIP13.55□□□□□ -0.248e-7■■■□□ 14.6
SHC1-210ENST00000448116 CCNB1P14635 433 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PHBP35232 272 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 MAPK6Q16659 721 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 NLRP9Q7RTR0 991 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 WDTC1Q8N5D0 677 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 KCTD6Q8NC69 237 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 ZNF280CQ8ND82 737 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 TCP10LQ8TDR4 215 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 ZNF570Q96NI8 536 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PAFAH2Q99487 392 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 NKX1-2Q9UD57 310 aaPredicted RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 ZNF214Q9UL59 606 aaPredicted RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 SHOC2Q9UQ13 582 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 CLUHO75153 1309 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 RPL22P35268 128 aaKnown RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 CDH8P55286 799 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 ZBTB16Q05516 673 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 TAF11Q15544 211 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 STXBP2Q15833 593 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 ZNF699Q32M78 642 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 ANKRD20A2Q5SQ80 823 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 ANKRD20A1Q5TYW2 823 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 ANKRD20A3Q5VUR7 823 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 ZC3H18Q86VM9 953 aaKnown RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 UNC45BQ8IWX7 931 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 LRRC71Q8N4P6 559 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 NIF3L1Q9GZT8 377 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 DHX33Q9H6R0 707 aaKnown RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 SENP1Q9P0U3 644 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 SLC17A7Q9P2U7 560 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 POLIQ9UNA4 740 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 IL1R2P27930 398 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 YARSP54577 528 aaKnown RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 TAF5Q15542 800 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 DUOXA2Q1HG44 320 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 ATP11CQ8NB49 1132 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 CPT1BQ92523 772 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 TBC1D10AQ9BXI6 508 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 TEX13BQ9BXU2 312 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 RABGEF1Q9UJ41 708 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 IKBKGQ9Y6K9 419 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 ITGAVP06756 1048 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 ARL2P36404 184 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 INHBEP58166 350 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 MOGSQ13724 837 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 HADHQ16836 314 aaKnown RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 TDRPQ86YL5 185 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 PPIL6Q8IXY8 311 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 NUDCD1Q96RS6 583 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 STK32BQ9NY57 414 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 PPP1R1BQ9UD71 204 aaPredicted RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 SLC24A2Q9UI40 661 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 XPO7Q9UIA9 1087 aaKnown RBP13.54□□□□□ -0.24
SHC1-210ENST00000448116 HACL1Q9UJ83 578 aa13.54□□□□□ -0.24
SHC1-210ENST00000448116 CFAP69A5D8W1 941 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 NEBLO76041 1014 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 TROVE2P10155 538 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHC1-210ENST00000448116 RAD23BP54727 409 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 SESN3P58005 492 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHC1-210ENST00000448116 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
SHC1-210ENST00000448116 PTPN20Q4JDL3 420 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 LRRC38Q5VT99 294 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 PPP1R2P3Q6NXS1 205 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 DRICH1Q6PGQ1 229 aaPredicted RBP13.53□□□□□ -0.24
SHC1-210ENST00000448116 BRSK2Q8IWQ3 736 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 PDIK1LQ8N165 341 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 RNF149Q8NC42 400 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 NKD2Q969F2 451 aaPredicted RBP13.53□□□□□ -0.24
SHC1-210ENST00000448116 TTC17Q96AE7 1141 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 NRBP2Q9NSY0 501 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 NFASCO94856 1347 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 ATP5HO75947 161 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 MT-ND3P03897 115 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 ABCD1P33897 745 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 EIF3EP60228 445 aaKnown RBP13.53□□□□□ -0.24
SHC1-210ENST00000448116 CRYMQ14894 314 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 LRRC6Q86X45 466 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 AGGF1Q8N302 714 aaeCLIP13.53□□□□□ -0.24
SHC1-210ENST00000448116 FAM13CQ8NE31 585 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 RFWD2Q8NHY2 731 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 C10orf82Q8WW14 230 aa13.53□□□□□ -0.24
SHC1-210ENST00000448116 METTL5Q9NRN9 209 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms