RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 A6NHS1 94 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 SUPT20HL2P0C7V6 817 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 EFTUD2Q15029 972 aaKnown RBP eCLIP20.03■□□□□ 0.8
SDCBP-204ENST00000447182 SEPT7Q16181 437 aaKnown RBP20.03■□□□□ 0.8
SDCBP-204ENST00000447182 TAZQ16635 292 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 SUPT20HL1Q3ZLR7 823 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 BBS12Q6ZW61 710 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 DHX37Q8IY37 1157 aaKnown RBP20.03■□□□□ 0.8
SDCBP-204ENST00000447182 ACTL9Q8TC94 416 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 WDR83Q9BRX9 315 aaKnown RBP20.03■□□□□ 0.8
SDCBP-204ENST00000447182 DCLRE1BQ9H816 532 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 FBXO40Q9UH90 709 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 CCDC189A1A4V9 331 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 BRD2P25440 801 aaKnown RBP20.03■□□□□ 0.8
SDCBP-204ENST00000447182 TGFB2P61812 414 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 OTUD4Q01804 1114 aaKnown RBP20.03■□□□□ 0.8
SDCBP-204ENST00000447182 GRM1Q13255 1194 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 CDCA2Q69YH5 1023 aaPredicted RBP20.03■□□□□ 0.8
SDCBP-204ENST00000447182 RHPN2Q8IUC4 686 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 WDTC1Q8N5D0 677 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 MICAL1Q8TDZ2 1067 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 ADAM33Q9BZ11 813 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 TMEM134Q9H6X4 195 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 MANSC1Q9H8J5 431 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 NUMBLQ9Y6R0 609 aa20.03■□□□□ 0.8
SDCBP-204ENST00000447182 COL4A5P29400 1685 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 LRRIQ4A6NIV6 560 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 STAM2O75886 525 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 CHRM1P11229 460 aaPredicted RBP20.02■□□□□ 0.8
SDCBP-204ENST00000447182 ATP6V1C1P21283 382 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 GDF10P55107 478 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 SP4Q02446 784 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 SLC25A11Q02978 314 aaKnown RBP20.02■□□□□ 0.8
SDCBP-204ENST00000447182 GAD2Q05329 585 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 CIAPIN1Q6FI81 312 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 GPAT2Q6NUI2 795 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 WDR49Q8IV35 697 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 BRSK2Q8IWQ3 736 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 FBXO36Q8NEA4 188 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 ATG4CQ96DT6 458 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 TRIM55Q9BYV6 548 aa20.02■□□□□ 0.8
SDCBP-204ENST00000447182 SPATA31C2B4DYI2 1134 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 WNT10BO00744 389 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 CCDC22O60826 627 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 DNAJC6O75061 913 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 TGDSO95455 350 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 CST3P01034 146 aaPredicted RBP20.02■□□□□ 0.79
SDCBP-204ENST00000447182 KRT7P08729 469 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 DHRS4L1P0CG22 281 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 ATP4AP20648 1035 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 CDC25CP30307 473 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 RPL22P35268 128 aaKnown RBP20.02■□□□□ 0.79
SDCBP-204ENST00000447182 MTMR2Q13614 643 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 C4orf50Q6ZRC1 276 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 CHSY1Q86X52 802 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 WNK4Q96J92 1243 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 MIPEPQ99797 713 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 STRIP2Q9ULQ0 834 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 AGTPBP1Q9UPW5 1226 aa20.02■□□□□ 0.79
SDCBP-204ENST00000447182 MAFBQ9Y5Q3 323 aaPredicted RBP20.02■□□□□ 0.79
SDCBP-204ENST00000447182 ABLIM1O14639 778 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 SKAP2O75563 359 aaPredicted RBP20.01■□□□□ 0.79
SDCBP-204ENST00000447182 EDN1P05305 212 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 GCKP35557 465 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 PTDSS1P48651 473 aaKnown RBP20.01■□□□□ 0.79
SDCBP-204ENST00000447182 SCARA3Q6AZY7 606 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 THNSL1Q8IYQ7 743 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 RFWD2Q8NHY2 731 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 FNIP1Q8TF40 1166 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 PTCD3Q96EY7 689 aaKnown RBP20.01■□□□□ 0.79
SDCBP-204ENST00000447182 NIF3L1Q9GZT8 377 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 CISHQ9NSE2 258 aa20.01■□□□□ 0.79
SDCBP-204ENST00000447182 CST8O60676 142 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 ENTPD5O75356 428 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 IL1BP01584 269 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 ACADSP16219 412 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 GNPTABQ3T906 1256 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 PALM2Q8IXS6 379 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 PDIK1LQ8N165 341 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 REPS2Q8NFH8 660 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 TTC8Q8TAM2 541 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 RSAD2Q8WXG1 361 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 BTBD10Q9BSF8 475 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 CADM1Q9BY67 442 aaKnown RBP20■□□□□ 0.79
SDCBP-204ENST00000447182 SLC17A7Q9P2U7 560 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 SAE1Q9UBE0 346 aaPredicted RBP20■□□□□ 0.79
SDCBP-204ENST00000447182 SIGLEC16A6NMB1 481 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 ATG7O95352 703 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 OATP04181 439 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 OAZ1P54368 228 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 GRIK3Q13003 919 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 TEPSINQ96N21 525 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 CYTH2Q99418 400 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 TSSK1BQ9BXA7 367 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 ZFATQ9P243 1243 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 DCTN4Q9UJW0 460 aa20■□□□□ 0.79
SDCBP-204ENST00000447182 WDR91A4D1P6 747 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 LRCH4O75427 683 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 TMEM63AO94886 807 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms