RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 TEKT3Q9BXF9 490 aa8.7□□□□□ -1.02
SMARCE1-206ENST00000447024 ZNF302Q9NR11 478 aa8.7□□□□□ -1.02
SMARCE1-206ENST00000447024 GULP1Q9UBP9 304 aa8.7□□□□□ -1.02
SMARCE1-206ENST00000447024 PCDHA2Q9Y5H9 948 aa8.7□□□□□ -1.02
SMARCE1-206ENST00000447024 KDM3AQ9Y4C1 1321 aa8.7□□□□□ -1.02
SMARCE1-206ENST00000447024 SCN5AQ14524 2016 aa8.7□□□□□ -1.02
SMARCE1-206ENST00000447024 M0QZ92 97 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 EDIL3O43854 480 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 NBNO60934 754 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 PSMD10O75832 226 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 CCNE2O96020 404 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 MMP1P03956 469 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 FDPSP14324 419 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 KRT2P35908 639 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 CDC42EP1Q00587 391 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 ORC2Q13416 577 aaPredicted RBP8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 SMAD4Q13485 552 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 GPNMBQ14956 572 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 SAFBQ15424 915 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 LRCH2Q5VUJ6 765 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 B3GNT9Q6UX72 402 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 CPNE8Q86YQ8 564 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 EXOC8Q8IYI6 725 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 LINC00482Q8N8I6 264 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 SLC28A3Q9HAS3 691 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 NRBP2Q9NSY0 501 aa8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 DDX25Q9UHL0 483 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-206ENST00000447024 BAG4O95429 457 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 AMHP03971 560 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 MARK3P27448 753 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 TMOD1P28289 359 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 SEPHS1P49903 392 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 WDR5P61964 334 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 MRPS6P82932 125 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 PPP2R5CQ13362 524 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 INF2Q27J81 1249 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 DPY19L1Q2PZI1 675 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 MARCH8Q5T0T0 291 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 CPZQ66K79 652 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 SWSAP1Q6NVH7 229 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 HERC6Q8IVU3 1022 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 CCDC60Q8IWA6 550 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 CKAP2LQ8IYA6 745 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 NECAB1Q8N987 351 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 ETNPPLQ8TBG4 499 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 AIFM3Q96NN9 605 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 JPH2Q9BR39 696 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 FTHL17Q9BXU8 183 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 KLHL25Q9H0H3 589 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 KCNMB3Q9NPA1 279 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 KCNJ14Q9UNX9 436 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 TELO2Q9Y4R8 837 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 BACE2Q9Y5Z0 518 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 IGSF9BQ9UPX0 1349 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 WDR81Q562E7 1941 aa8.68□□□□□ -1.02
SMARCE1-206ENST00000447024 DDX39AO00148 427 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 ADAMTS3O15072 1205 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 GJB5O95377 273 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 LARGE1O95461 756 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 TDP2O95551 362 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 PLATP00750 562 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 C8BP07358 591 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 KLRC1P26715 233 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 TRAPPC10P48553 1259 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 MGAT3Q09327 533 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 LETM2Q2VYF4 491 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 XKR3Q5GH77 459 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 MTHFD1LQ6UB35 978 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 TSHZ1Q6ZSZ6 1077 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 Q7L0L9 218 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 MIER3Q7Z3K6 550 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 DIS3L2Q8IYB7 885 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 TTC9BQ8N6N2 239 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 DBF4BQ8NFT6 615 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 LOXL4Q96JB6 756 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 C8orf76Q96K31 380 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 C8orf49Q96NF6 230 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 RAD9AQ99638 391 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 GORASP1Q9BQQ3 440 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 IFIH1Q9BYX4 1025 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 TTYH1Q9H313 450 aaPredicted RBP8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 FOXP1Q9H334 677 aaPredicted RBP8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 INSL6Q9Y581 213 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 TRPV2Q9Y5S1 764 aa8.67□□□□□ -1.02
SMARCE1-206ENST00000447024 TTC3P53804 2025 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 MICAL3Q7RTP6 2002 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 EVPLQ92817 2033 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 C2orf71A6NGG8 1288 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 C1QTNF3-AMACRE9PGA6 284 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 MARCH6O60337 910 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 CCNT1O60563 726 aaKnown RBP8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 CHRNA1P02708 482 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 ZNF20P17024 532 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 PSMC5P62195 406 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 ZNF394Q53GI3 561 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 FBXO47Q5MNV8 452 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 KRT40Q6A162 431 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 PIK3AP1Q6ZUJ8 805 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 CCDC83Q8IWF9 413 aa8.66□□□□□ -1.02
SMARCE1-206ENST00000447024 FAM184AQ8NB25 1140 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms