RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 EBF1Q9UH73 591 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 CAVIN2O95810 425 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 BMP15O95972 392 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 CYP2F1P24903 491 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 GBP1P32455 592 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 DDIT3P35638 169 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 TCEAL6Q6IPX3 200 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 CRELD2Q6UXH1 353 aaPredicted RBP26.2■■□□□ 1.78
PMS1-214ENST00000446877 ZNF720Q7Z2F6 126 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 CACTINQ8WUQ7 758 aaKnown RBP26.2■■□□□ 1.78
PMS1-214ENST00000446877 LEO1Q8WVC0 666 aaPredicted RBP26.2■■□□□ 1.78
PMS1-214ENST00000446877 TCEAL3Q969E4 200 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 HVCN1Q96D96 273 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 TRMT2BQ96GJ1 504 aaKnown RBP26.2■■□□□ 1.78
PMS1-214ENST00000446877 EDEM2Q9BV94 578 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 TMEM206Q9H813 350 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 DDX43Q9NXZ2 648 aaKnown RBP26.2■■□□□ 1.78
PMS1-214ENST00000446877 AGAP1Q9UPQ3 857 aa26.2■■□□□ 1.78
PMS1-214ENST00000446877 DCLK1O15075 740 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 NOL4O94818 638 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 GJB2P29033 226 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 POLR2BP30876 1174 aaKnown RBP26.19■■□□□ 1.78
PMS1-214ENST00000446877 DGKEP52429 567 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 NAIF1Q69YI7 327 aaPredicted RBP26.19■■□□□ 1.78
PMS1-214ENST00000446877 PSAPL1Q6NUJ1 521 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 TMEM86AQ8N2M4 240 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 FSIP1Q8NA03 581 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 MYRFLQ96LU7 910 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 CYP2S1Q96SQ9 504 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 FAM213AQ9BRX8 229 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 EXOC7Q9UPT5 735 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 WNT6Q9Y6F9 365 aa26.19■■□□□ 1.78
PMS1-214ENST00000446877 LAMA1P25391 3075 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 ITGB3P05106 788 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 ACAT1P24752 427 aaKnown RBP26.18■■□□□ 1.78
PMS1-214ENST00000446877 ADSSP30520 456 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 ZNF77Q15935 545 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 USP39Q53GS9 565 aaKnown RBP26.18■■□□□ 1.78
PMS1-214ENST00000446877 INTS6LQ5JSJ4 861 aaKnown RBP26.18■■□□□ 1.78
PMS1-214ENST00000446877 DAB2IPQ5VWQ8 1189 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 C11orf74Q86VG3 221 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 SPATA2LQ8IUW3 424 aaPredicted RBP26.18■■□□□ 1.78
PMS1-214ENST00000446877 TSTD1Q8NFU3 115 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 GTF3C4Q9UKN8 822 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 L1RE1Q9UN81 338 aa26.18■■□□□ 1.78
PMS1-214ENST00000446877 BCLAF3A2AJT9 711 aaKnown RBP26.17■■□□□ 1.78
PMS1-214ENST00000446877 SFR1Q86XK3 245 aa26.17■■□□□ 1.78
PMS1-214ENST00000446877 SCN4BQ8IWT1 228 aa26.17■■□□□ 1.78
PMS1-214ENST00000446877 CSGALNACT2Q8N6G5 542 aa26.17■■□□□ 1.78
PMS1-214ENST00000446877 IKZF4Q9H2S9 585 aa26.17■■□□□ 1.78
PMS1-214ENST00000446877 MRPL44Q9H9J2 332 aaKnown RBP26.17■■□□□ 1.78
PMS1-214ENST00000446877 GREB1Q4ZG55 1949 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 C4orf47A7E2U8 309 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 TADA3O75528 432 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 NOVA1P51513 510 aaKnown RBP26.16■■□□□ 1.78
PMS1-214ENST00000446877 KCNB1Q14721 858 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 RABEP1Q15276 862 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 EML3Q32P44 896 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 DYMQ7RTS9 669 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 LRRC52Q8N7C0 313 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 SH3RF2Q8TEC5 729 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 SLC22A12Q96S37 553 aa26.16■■□□□ 1.78
PMS1-214ENST00000446877 R3HCC1Q9Y3T6 440 aaKnown RBP26.16■■□□□ 1.78
PMS1-214ENST00000446877 CACNA1GO43497 2377 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 SCN1AP35498 2009 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 SPAG17Q6Q759 2223 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 PROS1P07225 676 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 HDCP19113 662 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 PCSK1P29120 753 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 LHX1P48742 406 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 GRIN1Q05586 938 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 BRSK2Q8IWQ3 736 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 ARL14EPQ8N8R7 260 aaPredicted RBP26.15■■□□□ 1.78
PMS1-214ENST00000446877 C1orf127Q8N9H9 656 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 EZH1Q92800 747 aaPredicted RBP26.15■■□□□ 1.78
PMS1-214ENST00000446877 ACCSQ96QU6 501 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 RBAKQ9NYW8 714 aaPredicted RBP26.15■■□□□ 1.78
PMS1-214ENST00000446877 SEL1LQ9UBV2 794 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 INVSQ9Y283 1065 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 SNX9Q9Y5X1 595 aa26.15■■□□□ 1.78
PMS1-214ENST00000446877 TSC2P49815 1807 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 KHNYNO15037 678 aaKnown RBP26.14■■□□□ 1.78
PMS1-214ENST00000446877 NFATC1O95644 943 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 LDHAP00338 332 aaKnown RBP26.14■■□□□ 1.78
PMS1-214ENST00000446877 KRT19P08727 400 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 PDE6CP51160 858 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 RBP5P82980 135 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 USP4Q13107 963 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 CFAP221Q4G0U5 840 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 SPATA18Q8TC71 538 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 SAAL1Q96ER3 474 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 FUBP3Q96I24 572 aaKnown RBP eCLIP26.14■■□□□ 1.78
PMS1-214ENST00000446877 TMX3Q96JJ7 454 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 GDAP2Q9NXN4 497 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 ITGA11Q9UKX5 1188 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 SMC3Q9UQE7 1217 aa26.14■■□□□ 1.78
PMS1-214ENST00000446877 FRYQ5TBA9 3013 aa26.14■■□□□ 1.77
PMS1-214ENST00000446877 KIF26AQ9ULI4 1882 aaPredicted RBP26.13■■□□□ 1.77
PMS1-214ENST00000446877 ERICH6BQ5W0A0 696 aa26.13■■□□□ 1.77
PMS1-214ENST00000446877 LARP1BQ659C4 914 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms