RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 RAB6CQ53S08 254 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 FAXCQ5TGI0 409 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 C4orf50Q6ZRC1 276 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 VPS52Q8N1B4 723 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 WDTC1Q8N5D0 677 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 CCDC33Q8N5R6 958 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 SAMD3Q8N6K7 520 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 TMEM174Q8WUU8 243 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 HSPH1Q92598 858 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 RBM41Q96IZ5 413 aaKnown RBP14.93□□□□□ -0.02
ERCC3-203ENST00000445889 CLPTM1LQ96KA5 538 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 DDX50Q9BQ39 737 aaKnown RBP14.93□□□□□ -0.02
ERCC3-203ENST00000445889 RAB6CQ9H0N0 254 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 CYLDQ9NQC7 956 aa14.93□□□□□ -0.02
ERCC3-203ENST00000445889 LGR5O75473 907 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 STBD1O95210 358 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 PYGBP11216 843 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 SNRPFP62306 86 aaKnown RBP14.92□□□□□ -0.02
ERCC3-203ENST00000445889 LMNB2Q03252 620 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 PSMD6Q15008 389 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 TSNAXIP1Q2TAA8 658 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 ZNF677Q86XU0 584 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 PHF13Q86YI8 300 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-203ENST00000445889 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.92□□□□□ -0.027e-8■■■■■ 87
ERCC3-203ENST00000445889 RSAD2Q8WXG1 361 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 TTC25Q96NG3 672 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 TMEM120AQ9BXJ8 343 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 MTMR12Q9C0I1 747 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 ZNRF3Q9ULT6 936 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 SCINQ9Y6U3 715 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 CAPN9O14815 690 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 NVLO15381 856 aaKnown RBP14.92□□□□□ -0.02
ERCC3-203ENST00000445889 LPXNO60711 386 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 TROVE2P10155 538 aaKnown RBP eCLIP14.92□□□□□ -0.02
ERCC3-203ENST00000445889 CD19P15391 556 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 GARTP22102 1010 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 RAP1GAPP47736 663 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 ARFIP2P53365 341 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 FAAP100Q0VG06 881 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 FSTL1Q12841 308 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 SLC45A4Q5BKX6 768 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 SNX30Q5VWJ9 437 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 ARFGAP1Q8N6T3 406 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 PHC3Q8NDX5 983 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 TSSK1BQ9BXA7 367 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 DCLRE1BQ9H816 532 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 NXF1Q9UBU9 619 aaKnown RBP14.92□□□□□ -0.02
ERCC3-203ENST00000445889 XPO7Q9UIA9 1087 aaKnown RBP14.92□□□□□ -0.02
ERCC3-203ENST00000445889 WASF2Q9Y6W5 498 aa14.92□□□□□ -0.02
ERCC3-203ENST00000445889 C2CD2LO14523 706 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 HAUS5O94927 633 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 PSMA2P25787 234 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 IRX4P78413 519 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 KLC1Q07866 573 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 RCN2Q14257 317 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 KBTBD12Q3ZCT8 623 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 PRAMEF18Q5VWM3 479 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-203ENST00000445889 CDHR3Q6ZTQ4 885 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 CTAGE3PQ8IX95 158 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 TEX9Q8N6V9 391 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 MCUR1Q96AQ8 359 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 CALN1Q9BXU9 219 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 SLC13A1Q9BZW2 595 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 SLC38A10Q9HBR0 1119 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 ARHGAP28Q9P2N2 729 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 CYB561D2O14569 222 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 LIN7AO14910 233 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-203ENST00000445889 GSC2O15499 205 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 TBX10O75333 385 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 MT-ND3P03897 115 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 ASNSP08243 561 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 MYL2P10916 166 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 ELK3P41970 407 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 YWHAGP61981 247 aaKnown RBP eCLIP14.91□□□□□ -0.02
ERCC3-203ENST00000445889 SARNPP82979 210 aaKnown RBP14.91□□□□□ -0.02
ERCC3-203ENST00000445889 SP2Q02086 613 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 EFHC2Q5JST6 749 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 WASHC2DQ5SRD0 308 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 PRPF39Q86UA1 669 aaKnown RBP14.91□□□□□ -0.02
ERCC3-203ENST00000445889 TDRPQ86YL5 185 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 ENDOVQ8N8Q3 282 aaKnown RBP14.91□□□□□ -0.02
ERCC3-203ENST00000445889 SHKBP1Q8TBC3 707 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 TSC22D3Q99576 134 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 ZCWPW1Q9H0M4 648 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 KCNK13Q9HB14 408 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 TAS2R1Q9NYW7 299 aa14.91□□□□□ -0.02
ERCC3-203ENST00000445889 TOP3BO95985 862 aaKnown RBP14.9□□□□□ -0.02
ERCC3-203ENST00000445889 EGFRP00533 1210 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 AMPD1P23109 780 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 SFNP31947 248 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 CDH8P55286 799 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 ACTR2P61160 394 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 BIRC2Q13490 618 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 SH3PXD2AQ5TCZ1 1133 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 SLC25A41Q8N5S1 370 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 DEPTORQ8TB45 409 aa14.9□□□□□ -0.02
ERCC3-203ENST00000445889 SCG3Q8WXD2 468 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms