RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 RBBP8NLQ8NC74 664 aaPredicted RBP18.33■□□□□ 0.52
LIME1-202ENST00000444951 OR10T2Q8NGX3 314 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 PIK3R5Q8WYR1 880 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 FAXDC2Q96IV6 333 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 TWNKQ96RR1 684 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 RTP3Q9BQQ7 232 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 SYT15Q9BQS2 421 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 NUP58Q9BVL2 599 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 NAA15Q9BXJ9 866 aaKnown RBP18.33■□□□□ 0.52
LIME1-202ENST00000444951 STK33Q9BYT3 514 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 ELOVL4Q9GZR5 314 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 KCNH6Q9H252 994 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 SMOC2Q9H3U7 446 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 FBXL5Q9UKA1 691 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.33■□□□□ 0.525e-7■■■■■ 31.5
LIME1-202ENST00000444951 DENND4AQ7Z401 1863 aa18.33■□□□□ 0.52
LIME1-202ENST00000444951 USP34Q70CQ2 3546 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 RNF225M0QZC1 329 aaPredicted RBP18.32■□□□□ 0.52
LIME1-202ENST00000444951 GABRDO14764 452 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 CILPO75339 1184 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 GFPT2O94808 682 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 OAZ2O95190 189 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 PDGFBP01127 241 aaPredicted RBP18.32■□□□□ 0.52
LIME1-202ENST00000444951 PCSK1P29120 753 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 VCPP55072 806 aaKnown RBP18.32■□□□□ 0.52
LIME1-202ENST00000444951 ARID5AQ03989 594 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 GOLGA8FQ08AF8 430 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 GOLGA8DPQ0D2H9 430 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 INCA1Q0VD86 236 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 CCDC142Q17RM4 750 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 RSPO2Q6UXX9 243 aaPredicted RBP18.32■□□□□ 0.52
LIME1-202ENST00000444951 UBR7Q8N806 425 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 WHAMMQ8TF30 809 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 NT5C1AQ9BXI3 368 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 IRAK3Q9Y616 596 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 CDY1Q9Y6F8 540 aa18.32■□□□□ 0.52
LIME1-202ENST00000444951 C2orf16Q68DN1 1984 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 F8VZ95 297 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 ADAM12O43184 909 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 GYPCP04921 128 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 TPM1P09493 284 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 FAM163BP0C2L3 166 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 CPB1P15086 417 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 CD19P15391 556 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 CASP14P31944 242 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 OR1D2P34982 312 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 RAD23BP54727 409 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 TSPY1Q01534 308 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 ITIH3Q06033 890 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 MRPL58Q14197 206 aaKnown RBP18.31■□□□□ 0.52
LIME1-202ENST00000444951 PDXDC1Q6P996 788 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 FBXL6Q8N531 539 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 TTC39CQ8N584 583 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 SHC3Q92529 594 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 HEXIM2Q96MH2 286 aaKnown RBP18.31■□□□□ 0.52
LIME1-202ENST00000444951 GPR88Q9GZN0 384 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 MTRRQ9UBK8 725 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 SSX2IPQ9Y2D8 614 aa18.31■□□□□ 0.52
LIME1-202ENST00000444951 CACNA1HO95180 2353 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 OR6C75A6NL08 312 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 LRRC53A6NM62 1247 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 CYP26A1O43174 497 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 PTPN1P18031 435 aaKnown RBP18.3■□□□□ 0.52
LIME1-202ENST00000444951 STAT1P42224 750 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 JAM2P57087 298 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 SLC39A12Q504Y0 691 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 MDH1BQ5I0G3 518 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 CES5AQ6NT32 575 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 TMC5Q6UXY8 1006 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 UNC93AQ86WB7 457 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 PALB2Q86YC2 1186 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 SLC4A11Q8NBS3 891 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 ZNF397Q8NF99 534 aaPredicted RBP18.3■□□□□ 0.52
LIME1-202ENST00000444951 SPATA18Q8TC71 538 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 BAP1Q92560 729 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 ANP32BQ92688 251 aaKnown RBP18.3■□□□□ 0.52
LIME1-202ENST00000444951 JAKMIP2Q96AA8 810 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 TNIP3Q96KP6 325 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 PGLYRP2Q96PD5 576 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 KLHL5Q96PQ7 755 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 CLSTN3Q9BQT9 956 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 ACBD6Q9BR61 282 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 TTYH3Q9C0H2 523 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 DNAI2Q9GZS0 605 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 ACP6Q9NPH0 428 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 FAM49BQ9NUQ9 324 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 GTF3C4Q9UKN8 822 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 CDH9Q9ULB4 789 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 CAPN11Q9UMQ6 739 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 LUC7L2Q9Y383 392 aaKnown RBP18.3■□□□□ 0.52
LIME1-202ENST00000444951 DAAM1Q9Y4D1 1078 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 BACE2Q9Y5Z0 518 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 PLXNA3P51805 1871 aa18.3■□□□□ 0.52
LIME1-202ENST00000444951 MYBPHLA2RUH7 354 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 TEX28O15482 410 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 LILRB3O75022 631 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 ASGR2P07307 311 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 CNPP09543 421 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms