RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ALADP13716 330 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 MTIF2P46199 727 aaKnown RBP18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 EPHA5P54756 1037 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 INCA1Q0VD86 236 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 SLC5A9Q2M3M2 681 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 CAVIN1Q6NZI2 390 aaKnown RBP18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 VSTM1Q6UX27 236 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 ACOT1Q86TX2 421 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 GIPC2Q8TF65 315 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 ING5Q8WYH8 240 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 FGF13Q92913 245 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 TMEM63CQ9P1W3 806 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 MUTYHQ9UIF7 546 aa18.59■□□□□ 0.57
SMARCAL1-209ENST00000444508 DOCK8Q8NF50 2099 aa18.58■□□□□ 0.57
SMARCAL1-209ENST00000444508 DCXO43602 365 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 MICAL2O94851 1124 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 BDNFP23560 247 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 ANXA13P27216 316 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 GRIK1P39086 918 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 GPR15P49685 360 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 LRMPQ12912 555 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 DDR2Q16832 855 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 PRSS36Q5K4E3 855 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 IRF2BP1Q8IU81 584 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 NPAS3Q8IXF0 933 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 GPR152Q8TDT2 470 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 TCEAL4Q96EI5 215 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 MED10Q9BTT4 135 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 NT5C1AQ9BXI3 368 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 ELOVL4Q9GZR5 314 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 FAM124BQ9H5Z6 455 aaPredicted RBP18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 GDE1Q9NZC3 331 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 HMGXB4Q9UGU5 601 aa18.58■□□□□ 0.56
SMARCAL1-209ENST00000444508 MUC3AQ02505 3323 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 TRIM66O15016 1216 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 CILPO75339 1184 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 CSH1P0DML2 217 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 CSH2P0DML3 217 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 CEBPBP17676 345 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 TBXAS1P24557 533 aaPredicted RBP18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 YWHAEP62258 255 aaKnown RBP18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 ORC1Q13415 861 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 CUL2Q13617 745 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 PTPN21Q16825 1174 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 TMC8Q8IU68 726 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 CRYBG2Q8N1P7 616 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 TATDN2Q93075 761 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 NT5C1BQ96P26 610 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 GCNAQ96QF7 691 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 LRRC3Q9BY71 257 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 B3GNT5Q9BYG0 378 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 IGSF9Q9P2J2 1179 aa18.57■□□□□ 0.56
SMARCAL1-209ENST00000444508 ASGR2P07307 311 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 CCR2P41597 374 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 KLHL40Q2TBA0 621 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 SDHAF4Q5VUM1 108 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 EHBP1Q8NDI1 1231 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 ENOX1Q8TC92 643 aaKnown RBP18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 KHSRPQ92945 711 aaKnown RBP eCLIP18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 NXPE3Q969Y0 559 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 MCRS1Q96EZ8 462 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 CEP295NLQ96MC4 621 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 ARID3AQ99856 593 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 ZNF518BQ9C0D4 1074 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 SLITRK6Q9H5Y7 841 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 KCNK12Q9HB15 430 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 ZNF334Q9HCZ1 680 aaPredicted RBP18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 CISHQ9NSE2 258 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 MAGED2Q9UNF1 606 aaPredicted RBP18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 SORCS3Q9UPU3 1222 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 NFE2L3Q9Y4A8 694 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 PTPRDP23468 1912 aa18.56■□□□□ 0.56
SMARCAL1-209ENST00000444508 A0A1W2PRU2 124 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 SLC38A8A6NNN8 435 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 PI4K2BG5E9Z4 385 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 CLDN5O00501 218 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 GJA1P17302 382 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 GABRR2P28476 465 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 CDC25CP30307 473 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 TYRO3Q06418 890 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 MTMR3Q13615 1198 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 MAN2A1Q16706 1144 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 ARHGAP15Q53QZ3 475 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 HSP90AA4PQ58FG1 418 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 C11orf57Q6ZUT1 292 aaPredicted RBP18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 MTSS1LQ765P7 747 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 FAM35AQ86V20 835 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 SHKBP1Q8TBC3 707 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 SPATA17Q96L03 361 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 TWNKQ96RR1 684 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 GPR88Q9GZN0 384 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 ATXN3LQ9H3M9 355 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 FAM49BQ9NUQ9 324 aa18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 UXTQ9UBK9 157 aaPredicted RBP18.55■□□□□ 0.56
SMARCAL1-209ENST00000444508 KCNJ18B7U540 433 aa18.54■□□□□ 0.56
SMARCAL1-209ENST00000444508 F8VP50 259 aa18.54■□□□□ 0.56
SMARCAL1-209ENST00000444508 MOSPD3O75425 235 aa18.54■□□□□ 0.56
SMARCAL1-209ENST00000444508 NOL4O94818 638 aa18.54■□□□□ 0.56
SMARCAL1-209ENST00000444508 CCDC130P13994 396 aa18.54■□□□□ 0.56
SMARCAL1-209ENST00000444508 PRKCSHP14314 528 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms