RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 C12orf29Q8N999 325 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 SHKBP1Q8TBC3 707 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 MYCBPAPQ8TBZ2 947 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 GIPC2Q8TF65 315 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 ING5Q8WYH8 240 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 ZSWIM1Q9BR11 485 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 SNX25Q9H3E2 840 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 SMOC2Q9H3U7 446 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 ABCB6Q9NP58 842 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 AVENQ9NQS1 362 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 FANCLQ9NW38 375 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 PCDHB5Q9Y5E4 795 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 TECTAO75443 2155 aa13.7□□□□□ -0.22
PDLIM2-212ENST00000443561 SYCE3A1L190 88 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 KCNJ18B7U540 433 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 RNF225M0QZC1 329 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 P4HA2O15460 535 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 BEST1O76090 585 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 LRG1P02750 347 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 CD58P19256 250 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 SLC9A1P19634 815 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 BDNFP23560 247 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 ELF1P32519 619 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 MAGEA11P43364 429 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 RAD23BP54727 409 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 USP46P62068 366 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 KCNMA1Q12791 1236 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 SMARCB1Q12824 385 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 CUL2Q13617 745 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 KCNJ12Q14500 433 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 IQCB1Q15051 598 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 NFKBIBQ15653 356 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 ANO6Q4KMQ2 910 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 PABPC1LQ4VXU2 614 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 STXBP5Q5T5C0 1151 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 SASS6Q6UVJ0 657 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 GET4Q7L5D6 327 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 GJD3Q8N144 294 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 C2orf15Q8WU43 125 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 PSMG2Q969U7 264 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 FUBP3Q96I24 572 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 CRACR2AQ9BSW2 395 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 INTS2Q9H0H0 1204 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 CYP3A43Q9HB55 503 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 CISHQ9NSE2 258 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 R3HCC1Q9Y3T6 440 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-212ENST00000443561 XYLBO75191 536 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 ASGR2P07307 311 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 FSHRP23945 695 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 FCARP24071 287 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 KRT31Q15323 416 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 NFE2Q16621 373 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 MAN2A1Q16706 1144 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 TCP11X2Q5H9J9 407 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 TRIM65Q6PJ69 517 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 DNAJB7Q7Z6W7 309 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 UNC93AQ86WB7 457 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 RSAD2Q8WXG1 361 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 FGF13Q92913 245 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 ZSWIM3Q96MP5 696 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 SMOQ99835 787 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 TUBGCP2Q9BSJ2 902 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 PIDD1Q9HB75 910 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 TAB2Q9NYJ8 693 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 EPS15L1Q9UBC2 864 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 DACH1Q9UI36 760 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 FAM50BQ9Y247 325 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 USTQ9Y2C2 406 aa13.68□□□□□ -0.22
PDLIM2-212ENST00000443561 HHLA1C9JL84 531 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 F8VP50 259 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 NOL4O94818 638 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 F11P03951 625 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 PTPN2P17706 415 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 MTIF2P46199 727 aaKnown RBP13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 ZNF132P52740 706 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 MYL5Q02045 173 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 ZNF394Q53GI3 561 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 RRAGAQ7L523 313 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 GPRIN1Q7Z2K8 1008 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 SPATA2LQ8IUW3 424 aaPredicted RBP13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 ZDHHC14Q8IZN3 488 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 RSPRY1Q96DX4 576 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 KCNK16Q96T55 309 aa13.67□□□□□ -0.22
PDLIM2-212ENST00000443561 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms