RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 DLG4P78352 724 aa23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 KIAA1257Q9ULG3 409 aa23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 B3GAT3O94766 335 aa23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 MCL1Q07820 350 aa23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 C9orf131Q5VYM1 1079 aa23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 RNF219Q5W0B1 726 aaPredicted RBP23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 SPOCD1Q6ZMY3 1216 aa23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 IRF2BP1Q8IU81 584 aa23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 SLC26A7Q8TE54 656 aa23.39■■□□□ 1.34
CTDSPL-206ENST00000443503 PRG3Q9Y2Y8 225 aaPredicted RBP23.39■■□□□ 1.33
CTDSPL-206ENST00000443503 RNF225M0QZC1 329 aaPredicted RBP23.39■■□□□ 1.33
CTDSPL-206ENST00000443503 CCNG2Q16589 344 aa23.39■■□□□ 1.33
CTDSPL-206ENST00000443503 SHROOM1Q2M3G4 852 aaPredicted RBP23.39■■□□□ 1.33
CTDSPL-206ENST00000443503 RABGAP1LQ5R372 815 aa23.39■■□□□ 1.33
CTDSPL-206ENST00000443503 PPHLN1Q8NEY8 458 aaKnown RBP23.39■■□□□ 1.33
CTDSPL-206ENST00000443503 SYNPO2Q9UMS6 1093 aa23.39■■□□□ 1.33
CTDSPL-206ENST00000443503 PCDHGC5Q9Y5F6 944 aa23.39■■□□□ 1.33
CTDSPL-206ENST00000443503 POLBP06746 335 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 TMCO4Q5TGY1 634 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 VSIG10LQ86VR7 867 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 LRRC43Q8N309 656 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 ASAP3Q8TDY4 903 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 FAM172AQ8WUF8 416 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 PTPRN2Q92932 1015 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 NEMP1O14524 444 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 SH3BGRP55822 239 aaPredicted RBP23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 POLE2P56282 527 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 CUL3Q13618 768 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 LCA5Q86VQ0 697 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 CCDC60Q8IWA6 550 aaPredicted RBP23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 ULK4Q96C45 1275 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 CNPY3Q9BT09 278 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 ADCY3O60266 1144 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 LSM8O95777 96 aaKnown RBP23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 SPRP35270 261 aaPredicted RBP23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 C1QBPQ07021 282 aaKnown RBP23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 PCSK7Q16549 785 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 UGP2Q16851 508 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 IPMKQ8NFU5 416 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 RXFP2Q8WXD0 754 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 BAP1Q92560 729 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 RMDN2Q96LZ7 410 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 PURBQ96QR8 312 aaKnown RBP23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 ZFYVE28Q9HCC9 887 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 ASTN1O14525 1302 aa23.38■■□□□ 1.33
CTDSPL-206ENST00000443503 ZNF189O75820 626 aaPredicted RBP23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 PRKCIP41743 596 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 ESRRGP62508 458 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 VEPH1Q14D04 833 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 STAMBPL1Q96FJ0 436 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 C20orf96Q9NUD7 363 aaPredicted RBP23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 ALDH5A1P51649 535 aaPredicted RBP23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 FAM131BQ86XD5 332 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 FBXO36Q8NEA4 188 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 TMEM176AQ96HP8 235 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 ZBTB18Q99592 522 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 HAUS8Q9BT25 410 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 PIK3CDO00329 1044 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 PTGER2P43116 358 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 CPT1AP50416 773 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 OAZ1P54368 228 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 PPATQ06203 517 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 ECM1Q16610 540 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 TAS2R42Q7RTR8 314 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 IL31RAQ8NI17 732 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 KRT35Q92764 455 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 ASIC4Q96FT7 647 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 OSMRQ99650 979 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 NDE1Q9NXR1 346 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 ZNF286BP0CG31 522 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 ITGB5P18084 799 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 CD302Q8IX05 232 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 ETNPPLQ8TBG4 499 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 FRMD8Q9BZ67 464 aaPredicted RBP23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 XAB2Q9HCS7 855 aaKnown RBP23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 USP18Q9UMW8 372 aa23.37■■□□□ 1.33
CTDSPL-206ENST00000443503 SPATA31C1P0DKV0 1188 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 EEF1B2P24534 225 aaKnown RBP23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 ARMC2Q8NEN0 867 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 DTX3LQ8TDB6 740 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 HSD17B14Q9BPX1 270 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 RARAP10276 462 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 PTPRAP18433 802 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 OR1G1P47890 313 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 GTF2A2P52657 109 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 OPTNQ96CV9 577 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 TASP1Q9H6P5 420 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 HACD3Q9P035 362 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 L3MBTL1Q9Y468 752 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 PPP2R3BQ9Y5P8 575 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 ZBTB22O15209 634 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 AP1G2O75843 785 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 AP2B1P63010 937 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 EFTUD2Q15029 972 aaKnown RBP eCLIP23.36■■□□□ 1.333e-7■□□□□ 11.1
CTDSPL-206ENST00000443503 COBLL1Q53SF7 1204 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 PLEKHH3Q7Z736 793 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 FAM111AQ96PZ2 611 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 EGFL8Q99944 293 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 TAS2R14Q9NYV8 317 aa23.36■■□□□ 1.33
CTDSPL-206ENST00000443503 GFAPP14136 432 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms