RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 GINS2Q9Y248 185 aa16.93■□□□□ 0.3
NLE1-202ENST00000442241 PPP1R12AO14974 1030 aaPredicted RBP16.92■□□□□ 0.3
NLE1-202ENST00000442241 CDKN2BP42772 138 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 MXD4Q14582 209 aaPredicted RBP16.92■□□□□ 0.3
NLE1-202ENST00000442241 PPP1R15BQ5SWA1 713 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 FAM47EQ6ZV65 393 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 SYDE1Q6ZW31 735 aaPredicted RBP16.92■□□□□ 0.3
NLE1-202ENST00000442241 C4orf33Q8N1A6 199 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 SPOCK2Q92563 424 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 STMN4Q9H169 189 aaPredicted RBP16.92■□□□□ 0.3
NLE1-202ENST00000442241 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.92■□□□□ 0.3
NLE1-202ENST00000442241 SLC12A4Q9UP95 1085 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 CCT8L1PA6NM43 557 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 CST8O60676 142 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 MBTD1Q05BQ5 628 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 MMRN1Q13201 1228 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 KCTD2Q14681 263 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 CDO1Q16878 200 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 TFDP3Q5H9I0 405 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 ALLCQ8N6M5 410 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 RBM41Q96IZ5 413 aaKnown RBP16.92■□□□□ 0.3
NLE1-202ENST00000442241 PIWIL1Q96J94 861 aaKnown RBP16.92■□□□□ 0.3
NLE1-202ENST00000442241 ELOVL4Q9GZR5 314 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 RPF1Q9H9Y2 349 aaKnown RBP16.92■□□□□ 0.3
NLE1-202ENST00000442241 EBF2Q9HAK2 575 aa16.92■□□□□ 0.3
NLE1-202ENST00000442241 EXOC1LA0A1B0GW35 172 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 RASA4BC9J798 803 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 DNALI1O14645 258 aaPredicted RBP16.91■□□□□ 0.3
NLE1-202ENST00000442241 RASA4O43374 803 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 LRCH4O75427 683 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 GCAP28676 217 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 RAD23BP54727 409 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 OTUD4Q01804 1114 aaKnown RBP16.91■□□□□ 0.3
NLE1-202ENST00000442241 NPNTQ6UXI9 565 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 PIGWQ7Z7B1 504 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 ACTL9Q8TC94 416 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 PTPRHQ9HD43 1115 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 HOMER3Q9NSC5 361 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 AKT3Q9Y243 479 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 TCRBV7S3A2A0A539 114 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 ACKR2O00590 384 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 GSTA1P08263 222 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 STAG3L1P0CL83 205 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 TGFB3P10600 412 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 INSRRP14616 1297 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 CETN2P41208 172 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 TMEM62Q0P6H9 643 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 PDIA2Q13087 525 aaKnown RBP16.91■□□□□ 0.3
NLE1-202ENST00000442241 RIPK1Q13546 671 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 EAPPQ56P03 285 aaPredicted RBP16.91■□□□□ 0.3
NLE1-202ENST00000442241 ZNF667Q5HYK9 610 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 TSHZ1Q6ZSZ6 1077 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 SGIP1Q9BQI5 828 aa16.91■□□□□ 0.3
NLE1-202ENST00000442241 TRIM6Q9C030 488 aaPredicted RBP16.91■□□□□ 0.3
NLE1-202ENST00000442241 C12orf65Q9H3J6 166 aaKnown RBP16.91■□□□□ 0.3
NLE1-202ENST00000442241 A0A0G2JLL6 359 aaPredicted RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 M0QYV0 167 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 ASAP2O43150 1006 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 PKN2Q16513 984 aaKnown RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 ACCSLQ4AC99 568 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 MSS51Q4VC12 460 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 PRRT2Q7Z6L0 340 aaPredicted RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 ZCCHC9Q8N567 271 aaKnown RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 C12orf29Q8N999 325 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 FAM167AQ96KS9 214 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 LPIN3Q9BQK8 851 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 CALN1Q9BXU9 219 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 IFT122Q9HBG6 1241 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 OTOFQ9HC10 1997 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 IGKV6-21A0A0C4DH24 114 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 C3orf70A6NLC5 250 aaPredicted RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 POLR2BP30876 1174 aaKnown RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 STX2P32856 288 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 RGS7P49802 495 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 VCPP55072 806 aaKnown RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 CCDC33Q8N5R6 958 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 SLC4A11Q8NBS3 891 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 HEXIM2Q96MH2 286 aaKnown RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 TGS1Q96RS0 853 aaKnown RBP16.9■□□□□ 0.3
NLE1-202ENST00000442241 FZD8Q9H461 694 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 AGAP1Q9UPQ3 857 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 BRCA2P51587 3418 aa16.9■□□□□ 0.3
NLE1-202ENST00000442241 A0A1W2PPM1 405 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 PROZP22891 400 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 SSTR1P30872 391 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 FOXN2P32314 431 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 SLC25A11Q02978 314 aaKnown RBP16.89■□□□□ 0.3
NLE1-202ENST00000442241 CAV1Q03135 178 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 OASLQ15646 514 aaKnown RBP16.89■□□□□ 0.3
NLE1-202ENST00000442241 C15orf59Q2T9L4 293 aaPredicted RBP16.89■□□□□ 0.3
NLE1-202ENST00000442241 UNC45BQ8IWX7 931 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 ANKS4BQ8N8V4 417 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 OPTNQ96CV9 577 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 PPP2R3BQ9Y5P8 575 aa16.89■□□□□ 0.3
NLE1-202ENST00000442241 NEBLO76041 1014 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 MICAL2O94851 1124 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 LSM8O95777 96 aaKnown RBP16.89■□□□□ 0.29
NLE1-202ENST00000442241 EIF4BP23588 611 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms