RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CD52P31358 61 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 GABRB2P47870 512 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 VEGFBP49765 207 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 CALCOCO2Q13137 446 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 CASP8Q14790 479 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 PPP1R7Q15435 360 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 PTPN20Q4JDL3 420 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 CCSAPQ6IQ19 270 aaPredicted RBP6.35□□□□□ -1.39
VPS50-205ENST00000441602 MAP7D3Q8IWC1 876 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 THEM5Q8N1Q8 247 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 RSPH1Q8WYR4 309 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 FAM193BQ96PV7 902 aaPredicted RBP6.35□□□□□ -1.39
VPS50-205ENST00000441602 MRPL45Q9BRJ2 306 aaKnown RBP6.35□□□□□ -1.39
VPS50-205ENST00000441602 CNPY3Q9BT09 278 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS50-205ENST00000441602 MED4Q9NPJ6 270 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 KANSL3Q9P2N6 904 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 L1RE1Q9UN81 338 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 PHF24Q9UPV7 400 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 TRIM17Q9Y577 477 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 SCN10AQ9Y5Y9 1956 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 ARVCFO00192 962 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 HOXA2O43364 376 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 CHRNA1P02708 482 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 SLC7A5Q01650 507 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 CYP4A22Q5TCH4 519 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 ALS2CLQ60I27 953 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 CROCCP2Q86T23 111 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 C12orf50Q8NA57 414 aaPredicted RBP6.35□□□□□ -1.39
VPS50-205ENST00000441602 ANKRD52Q8NB46 1076 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 UBA3Q8TBC4 463 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 CAVIN3Q969G5 261 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 MCRS1Q96EZ8 462 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 PPP1R10Q96QC0 940 aaKnown RBP6.35□□□□□ -1.39
VPS50-205ENST00000441602 TWNKQ96RR1 684 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 GAD1Q99259 594 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 ADAM2Q99965 735 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 OSBPL8Q9BZF1 889 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 LRRC4Q9HBW1 653 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 METTL5Q9NRN9 209 aaKnown RBP6.35□□□□□ -1.39
VPS50-205ENST00000441602 CHORDC1Q9UHD1 332 aaPredicted RBP6.35□□□□□ -1.39
VPS50-205ENST00000441602 CITO14578 2027 aa6.35□□□□□ -1.39
VPS50-205ENST00000441602 A0A0U1RQF3 1178 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 GOLGA6L10A6NI86 522 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 MEFVO15553 781 aaPredicted RBP6.34□□□□□ -1.39
VPS50-205ENST00000441602 PRPSAP2O60256 369 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 PARNO95453 639 aaKnown RBP6.34□□□□□ -1.39
VPS50-205ENST00000441602 PYGMP11217 842 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 IBSPP21815 317 aaPredicted RBP6.34□□□□□ -1.39
VPS50-205ENST00000441602 YY1P25490 414 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 SDC4P31431 198 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 MLH1P40692 756 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 GPD2P43304 727 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 CAV1Q03135 178 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 TUSC3Q13454 348 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 TFDP2Q14188 446 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 DSC3Q14574 896 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 MAPRE1Q15691 268 aaKnown RBP6.34□□□□□ -1.39
VPS50-205ENST00000441602 EFHC1Q5JVL4 640 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 ZNF365Q70YC5 407 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 XYLT1Q86Y38 959 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 SEPT8Q92599 483 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 SENP8Q96LD8 212 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 TRIM62Q9BVG3 475 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 MAK16Q9BXY0 300 aaKnown RBP6.34□□□□□ -1.39
VPS50-205ENST00000441602 RNF39Q9H2S5 420 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 FAM49BQ9NUQ9 324 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 PCYOX1Q9UHG3 505 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 DMGDHQ9UI17 866 aaKnown RBP6.34□□□□□ -1.39
VPS50-205ENST00000441602 PTCH2Q9Y6C5 1203 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 LRRD1A4D1F6 860 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 FBXO21O94952 628 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 EOMESO95936 686 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 CFHP08603 1231 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 SELPP16109 830 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 ADORA2BP29275 332 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 PCK1P35558 622 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 COILP38432 576 aaPredicted RBP6.34□□□□□ -1.39
VPS50-205ENST00000441602 LILRA4P59901 499 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 ORC1Q13415 861 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 LPIN1Q14693 890 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 CYP1B1Q16678 543 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 SOWAHAQ2M3V2 549 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 JAMLQ86YT9 394 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 ABI1Q8IZP0 508 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 AENQ8WTP8 325 aaKnown RBP6.34□□□□□ -1.39
VPS50-205ENST00000441602 FUT8Q9BYC5 575 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 CDH9Q9ULB4 789 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 LRFN2Q9ULH4 789 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 EFR3BQ9Y2G0 817 aa6.34□□□□□ -1.39
VPS50-205ENST00000441602 A0A1W2PQ45 241 aaPredicted RBP6.34□□□□□ -1.4
VPS50-205ENST00000441602 A0A1W2PQY0 241 aa6.34□□□□□ -1.4
VPS50-205ENST00000441602 DPYSL4O14531 572 aa6.34□□□□□ -1.4
VPS50-205ENST00000441602 TRAPPC3O43617 180 aa6.34□□□□□ -1.4
VPS50-205ENST00000441602 ZMYND10O75800 440 aa6.34□□□□□ -1.4
VPS50-205ENST00000441602 ZNF189O75820 626 aaPredicted RBP6.34□□□□□ -1.4
VPS50-205ENST00000441602 PDGFRBP09619 1106 aa6.34□□□□□ -1.4
VPS50-205ENST00000441602 FAM200BP0CF97 657 aa6.34□□□□□ -1.4
VPS50-205ENST00000441602 PDGFRAP16234 1089 aa6.34□□□□□ -1.4
VPS50-205ENST00000441602 PTPN7P35236 360 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms