RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 FAM160A1Q05DH4 1040 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 KARSQ15046 597 aaKnown RBP14.06□□□□□ -0.16
SP4-203ENST00000440636 ZNF77Q15935 545 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 NFE2Q16621 373 aaPredicted RBP14.06□□□□□ -0.16
SP4-203ENST00000440636 PSAPL1Q6NUJ1 521 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 NT5DC4Q86YG4 428 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 PDCL2Q8N4E4 241 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 CPA6Q8N4T0 437 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 OSCP1Q8WVF1 389 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 TRMT2BQ96GJ1 504 aaKnown RBP14.06□□□□□ -0.16
SP4-203ENST00000440636 MYRFLQ96LU7 910 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 ZNF560Q96MR9 790 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 SLC22A12Q96S37 553 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 ABCB6Q9NP58 842 aa14.06□□□□□ -0.16
SP4-203ENST00000440636 UXTQ9UBK9 157 aaPredicted RBP14.06□□□□□ -0.16
SP4-203ENST00000440636 NUP205Q92621 2012 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
SP4-203ENST00000440636 RHOBTB1O94844 696 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 IL18RAPO95256 599 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 CYP2F1P24903 491 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 PNPLA4P41247 253 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 WNT7BP56706 349 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 CREB5Q02930 508 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 GRIN1Q05586 938 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 USP4Q13107 963 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 DMC1Q14565 340 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 ELF2Q15723 593 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 DDR2Q16832 855 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 EML3Q32P44 896 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 LARP4BQ92615 738 aaKnown RBP14.05□□□□□ -0.16
SP4-203ENST00000440636 CD101Q93033 1021 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 EXOC4Q96A65 974 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 ACDQ96AP0 544 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 CYP2S1Q96SQ9 504 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 PKMYT1Q99640 499 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 ACBD6Q9BR61 282 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 EDEM2Q9BV94 578 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 TMEM206Q9H813 350 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 DUS2Q9NX74 493 aaKnown RBP14.05□□□□□ -0.16
SP4-203ENST00000440636 L1RE1Q9UN81 338 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 ANAPC1Q9H1A4 1944 aa14.05□□□□□ -0.16
SP4-203ENST00000440636 C4orf47A7E2U8 309 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 PPP1R37O75864 691 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 CAVIN2O95810 425 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 PROS1P07225 676 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 POLR2BP30876 1174 aaKnown RBP14.04□□□□□ -0.16
SP4-203ENST00000440636 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
SP4-203ENST00000440636 CCDC142Q17RM4 750 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 INTS6LQ5JSJ4 861 aaKnown RBP14.04□□□□□ -0.16
SP4-203ENST00000440636 SCARA3Q6AZY7 606 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 ZNF720Q7Z2F6 126 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 C1orf127Q8N9H9 656 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 POMGNT1Q8WZA1 660 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 ATP2A3Q93084 1043 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 STRA6Q9BX79 667 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 TRPC7Q9HCX4 862 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 DDX43Q9NXZ2 648 aaKnown RBP14.04□□□□□ -0.16
SP4-203ENST00000440636 RALYQ9UKM9 306 aaKnown RBP14.04□□□□□ -0.16
SP4-203ENST00000440636 WNT6Q9Y6F9 365 aa14.04□□□□□ -0.16
SP4-203ENST00000440636 GON4LQ3T8J9 2241 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 BAHCC1Q9P281 2608 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 AKAP13Q12802 2813 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 TRAV19A0A0A6YYK7 116 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 LNP1A1A4G5 178 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 H3BQV1 296 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 GIPC1O14908 333 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 ITGB3P05106 788 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 CKMP06732 381 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 USP17L7P0C7H9 530 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 ACAT1P24752 427 aaKnown RBP14.03□□□□□ -0.16
SP4-203ENST00000440636 DDIT3P35638 169 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 LONP1P36776 959 aaKnown RBP14.03□□□□□ -0.16
SP4-203ENST00000440636 IFNAR2P48551 515 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 NOVA1P51513 510 aaKnown RBP14.03□□□□□ -0.16
SP4-203ENST00000440636 TFAMQ00059 246 aaKnown RBP14.03□□□□□ -0.16
SP4-203ENST00000440636 PSMD2Q13200 908 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 POSTNQ15063 836 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 OSTM1Q86WC4 334 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 SFR1Q86XK3 245 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 TMEM86AQ8N2M4 240 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 ZSWIM2Q8NEG5 633 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 RASSF8Q8NHQ8 419 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 HVCN1Q96D96 273 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 GCNT4Q9P109 453 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 GTF3C4Q9UKN8 822 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 AGAP1Q9UPQ3 857 aa14.03□□□□□ -0.16
SP4-203ENST00000440636 PKD1L2Q7Z442 2459 aa14.02□□□□□ -0.16
SP4-203ENST00000440636 ASCC3Q8N3C0 2202 aaKnown RBP14.02□□□□□ -0.16
SP4-203ENST00000440636 THADAQ6YHU6 1953 aa14.02□□□□□ -0.16
SP4-203ENST00000440636 C2orf78A6NCI8 922 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 HCRTO43612 131 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 HUS1O60921 280 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 TCF3P15923 654 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 GJB2P29033 226 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 DGKEP52429 567 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 MYL7Q01449 175 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 KCNA1Q09470 495 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 CFAP221Q4G0U5 840 aa14.02□□□□□ -0.17
SP4-203ENST00000440636 PMS2CLQ68D20 193 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms