RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ANXA13P27216 316 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 CASP4P49662 377 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 KPNA1P52294 538 aaPredicted RBP21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 AP3M2P53677 418 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 NLRP12P59046 1061 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 CCDC142Q17RM4 750 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 ZNF699Q32M78 642 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 CFAP221Q4G0U5 840 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 ZC3H14Q6PJT7 736 aaKnown RBP21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 KRBA2Q6ZNG9 492 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 IL21Q9HBE4 155 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 THG1LQ9NWX6 298 aaKnown RBP21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 DLGAP2Q9P1A6 1054 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 KIF26AQ9ULI4 1882 aaPredicted RBP21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 NCANO14594 1321 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 SLC38A8A6NNN8 435 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 PDXKO00764 312 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 CHADO15335 359 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 ATP2C2O75185 946 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 PRAMEF12O95522 483 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 GLULP15104 373 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 LMO2P25791 158 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 DDX6P26196 483 aaKnown RBP eCLIP21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 ATICP31939 592 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 GNL1P36915 607 aaPredicted RBP21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 MYL6P60660 151 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 ARHGAP29Q52LW3 1261 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 MAB21L3Q8N8X9 362 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 BPIFB1Q8TDL5 484 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 FAM3CQ92520 227 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 RSPRY1Q96DX4 576 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 PKMYT1Q99640 499 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 MRPL45Q9BRJ2 306 aaKnown RBP21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 MKNK1Q9BUB5 465 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 SMG9Q9H0W8 520 aaKnown RBP21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 TRPC7Q9HCX4 862 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 TRPV5Q9NQA5 729 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 OBP2AQ9NY56 170 aa21.22■□□□□ 0.99
SHROOM1-204ENST00000440118 GREB1Q4ZG55 1949 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 MYH10P35580 1976 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 FAM237AA0A1B0GTK4 181 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 CST3P01034 146 aaPredicted RBP21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 HMGA1P17096 107 aaKnown RBP21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 GRIK1P39086 918 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 NUCB2P80303 420 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 FCHO2Q0JRZ9 810 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 MDH1BQ5I0G3 518 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 SLC9A9Q8IVB4 645 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 CMTM8Q8IZV2 173 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 CELF5Q8N6W0 485 aaKnown RBP21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 TTC16Q8NEE8 873 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 ZFYVE19Q96K21 471 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 KCTD10Q9H3F6 313 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 GOLPH3LQ9H4A5 285 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 CRTAC1Q9NQ79 661 aa21.21■□□□□ 0.99
SHROOM1-204ENST00000440118 LRRIQ3A6PVS8 624 aaPredicted RBP21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 A8MXQ7 604 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 PROB1E7EW31 1015 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 NOL4O94818 638 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 ZNF202O95125 648 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 BDNFP23560 247 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 MAGEA11P43364 429 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 PLCB2Q00722 1185 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 DPYDQ12882 1025 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 NCOA4Q13772 614 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 ZNF667Q5HYK9 610 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 TDRD10Q5VZ19 366 aaKnown RBP21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 TXNDC8Q6A555 127 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 FAM171BQ6P995 826 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 C1orf228Q6PIY5 440 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 VSTM1Q6UX27 236 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 SCARA5Q6ZMJ2 495 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 TTC8Q8TAM2 541 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 ZNF516Q92618 1163 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 MSANTD3Q96H12 275 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 SLC46A2Q9BY10 475 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 MAPK8IP1Q9UQF2 711 aa21.2■□□□□ 0.98
SHROOM1-204ENST00000440118 TRIM66O15016 1216 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 TACC1O75410 805 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 RHOBTB3O94955 611 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 F11P03951 625 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 CKMP06732 381 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 P4HA1P13674 534 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 NR2F2P24468 414 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 CCNE1P24864 410 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 CC2D1AQ6P1N0 951 aaPredicted RBP21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 LIMS2Q7Z4I7 341 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 MYCBPAPQ8TBZ2 947 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 PARD3BQ8TEW8 1205 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 TRMT2BQ96GJ1 504 aaKnown RBP21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 PCED1BQ96HM7 432 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 C8orf33Q9H7E9 229 aaPredicted RBP21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 KIF9Q9HAQ2 790 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 EHD2Q9NZN4 543 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 HELZP42694 1942 aaKnown RBP21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 RIF1Q5UIP0 2472 aaKnown RBP21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 ANAPC1Q9H1A4 1944 aa21.19■□□□□ 0.98
SHROOM1-204ENST00000440118 FAM186AA6NE01 2351 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 USP34Q70CQ2 3546 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 MYO15AQ9UKN7 3530 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms